AT2G34860 (EDA3)


Aliases : EDA3

Description : DnaJ/Hsp40 cysteine-rich domain superfamily protein


Gene families : OG0006306 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006306_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G34860

Target Alias Description ECC score Gene Family Method Actions
Aev_g02822 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.1 OrthoFinder output from all 47 species
Ala_g20902 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.02 OrthoFinder output from all 47 species
Als_g00346 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.02 OrthoFinder output from all 47 species
Aob_g35831 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.11 OrthoFinder output from all 47 species
Aop_g08229 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.04 OrthoFinder output from all 47 species
Cba_g70750 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.281 No alias No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020927.61 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Cre11.g475850 EDA3 Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Dcu_g41306 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.11 OrthoFinder output from all 47 species
Dde_g15497 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01025384001 EDA3 Photosynthesis.photophosphorylation.photosystem... 0.09 OrthoFinder output from all 47 species
Len_g09504 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.02 OrthoFinder output from all 47 species
Len_g29065 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g03693 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.03 OrthoFinder output from all 47 species
Mp4g08230.1 EDA3 PSA2 protein involved in PS-I assembly 0.06 OrthoFinder output from all 47 species
Nbi_g10835 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.03 OrthoFinder output from all 47 species
Ore_g19771 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g24228 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g62171 EDA3 protein involved in PS-I assembly *(PSA2) & original... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025356 EDA3 component *(RPP30/POP2) of RNA-dependent RNase P complex... 0.03 OrthoFinder output from all 47 species
Sam_g40405 No alias protein involved in PS-I assembly *(PSA2) & original... 0.02 OrthoFinder output from all 47 species
Sam_g40406 No alias protein involved in PS-I assembly *(PSA2) & original... 0.02 OrthoFinder output from all 47 species
Smo159064 EDA3 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Zm00001e003758_P001 Zm00001e003758 Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Zea... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006098 pentose-phosphate shunt RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
BP GO:0009561 megagametogenesis IMP Interproscan
BP GO:0009902 chloroplast relocation RCA Interproscan
BP GO:0010027 thylakoid membrane organization RCA Interproscan
BP GO:0010304 PSII associated light-harvesting complex II catabolic process RCA Interproscan
BP GO:0015995 chlorophyll biosynthetic process RCA Interproscan
BP GO:0016117 carotenoid biosynthetic process RCA Interproscan
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA Interproscan
BP GO:0019684 photosynthesis, light reaction RCA Interproscan
BP GO:0034660 ncRNA metabolic process RCA Interproscan
BP GO:0035304 regulation of protein dephosphorylation RCA Interproscan
BP GO:0042793 plastid transcription RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process IEP HCCA
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003727 single-stranded RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003959 NADPH dehydrogenase activity IEP HCCA
MF GO:0004047 aminomethyltransferase activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0005527 macrolide binding IEP HCCA
MF GO:0005528 FK506 binding IEP HCCA
CC GO:0005960 glycine cleavage complex IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005982 starch metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006000 fructose metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008187 poly-pyrimidine tract binding IEP HCCA
MF GO:0008266 poly(U) RNA binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009526 plastid envelope IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
CC GO:0009528 plastid inner membrane IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009543 chloroplast thylakoid lumen IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009696 salicylic acid metabolic process IEP HCCA
BP GO:0009697 salicylic acid biosynthetic process IEP HCCA
BP GO:0009735 response to cytokinin IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009746 response to hexose IEP HCCA
BP GO:0009765 photosynthesis, light harvesting IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009768 photosynthesis, light harvesting in photosystem I IEP HCCA
BP GO:0009773 photosynthetic electron transport in photosystem I IEP HCCA
CC GO:0009782 photosystem I antenna complex IEP HCCA
CC GO:0009941 chloroplast envelope IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010103 stomatal complex morphogenesis IEP HCCA
BP GO:0010114 response to red light IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
BP GO:0010190 cytochrome b6f complex assembly IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP HCCA
BP GO:0010275 NAD(P)H dehydrogenase complex assembly IEP HCCA
CC GO:0010319 stromule IEP HCCA
CC GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone) IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0017014 protein nitrosylation IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0018119 peptidyl-cysteine S-nitrosylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018198 peptidyl-cysteine modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
BP GO:0019252 starch biosynthetic process IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019464 glycine decarboxylation via glycine cleavage system IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0019757 glycosinolate metabolic process IEP HCCA
BP GO:0019760 glucosinolate metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
CC GO:0030076 light-harvesting complex IEP HCCA
CC GO:0030095 chloroplast photosystem II IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0030388 fructose 1,6-bisphosphate metabolic process IEP HCCA
MF GO:0031409 pigment binding IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
CC GO:0031978 plastid thylakoid lumen IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034284 response to monosaccharide IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034644 cellular response to UV IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0045037 protein import into chloroplast stroma IEP HCCA
BP GO:0045038 protein import into chloroplast thylakoid membrane IEP HCCA
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP HCCA
MF GO:0045157 electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070141 response to UV-A IEP HCCA
BP GO:0071484 cellular response to light intensity IEP HCCA
BP GO:0071486 cellular response to high light intensity IEP HCCA
BP GO:0071492 cellular response to UV-A IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0090626 plant epidermis morphogenesis IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1904062 regulation of monoatomic cation transmembrane transport IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!