AT1G32230 (AtRCD1, RCD1, ATP8, CEO1, CEO)


Aliases : AtRCD1, RCD1, ATP8, CEO1, CEO

Description : WWE protein-protein interaction domain protein family


Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G32230

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00059840 AtRCD1, RCD1,... Probable inactive poly [ADP-ribose] polymerase SRO1... 0.05 OrthoFinder output from all 47 species
Adi_g056817 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Adi_g087899 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Als_g10806 SRO1 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Aob_g26676 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Aop_g11358 AtRCD1, RCD1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13526 SRO1 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0161.g054130 SRO1 organellar-signalling mediator *(RCD1) & original... 0.05 OrthoFinder output from all 47 species
Cba_g29470 SRO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G015900.1 SRO3, Ceric.03G015900 organellar-signalling mediator *(RCD1) & original... 0.08 OrthoFinder output from all 47 species
Ceric.15G016800.1 SRO2, Ceric.15G016800 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.29G059600.1 AtRCD1, RCD1,... not classified & original description: pacid=50625179... 0.05 OrthoFinder output from all 47 species
Dac_g09083 SRO2 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Dac_g12827 SRO5 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g22889 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Dde_g11890 SRO2 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Dde_g17490 SRO1 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01013086001 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.05 OrthoFinder output from all 47 species
GSVIVT01013090001 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.05 OrthoFinder output from all 47 species
Gb_33339 SRO1 Probable inactive poly [ADP-ribose] polymerase SRO1... 0.03 OrthoFinder output from all 47 species
Gb_39925 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.03 OrthoFinder output from all 47 species
LOC_Os06g13860.1 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.04 OrthoFinder output from all 47 species
LOC_Os10g42710.1 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.05 OrthoFinder output from all 47 species
MA_5033617g0010 SRO1 Probable inactive poly [ADP-ribose] polymerase SRO1... 0.05 OrthoFinder output from all 47 species
MA_577g0010 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.04 OrthoFinder output from all 47 species
Msp_g03984 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.04 OrthoFinder output from all 47 species
Msp_g15630 SRO5 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Pir_g45632 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.04 OrthoFinder output from all 47 species
Sam_g29371 No alias organellar-signalling mediator *(RCD1) & original... 0.04 OrthoFinder output from all 47 species
Solyc08g005270.3.1 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.04 OrthoFinder output from all 47 species
Solyc08g076420.3.1 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.03 OrthoFinder output from all 47 species
Spa_g12730 SRO1 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Tin_g07052 AtRCD1, RCD1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08708 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e002482_P002 SRO1, Zm00001e002482 Inactive poly [ADP-ribose] polymerase RCD1... 0.12 OrthoFinder output from all 47 species
Zm00001e012999_P001 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade RCA Interproscan
BP GO:0000303 response to superoxide IMP Interproscan
BP GO:0000303 response to superoxide RCA Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
BP GO:0006096 glycolytic process RCA Interproscan
BP GO:0006486 protein glycosylation RCA Interproscan
BP GO:0006612 protein targeting to membrane RCA Interproscan
BP GO:0006623 protein targeting to vacuole RCA Interproscan
BP GO:0006809 nitric oxide biosynthetic process IMP Interproscan
BP GO:0006833 water transport RCA Interproscan
BP GO:0006970 response to osmotic stress IMP Interproscan
BP GO:0006972 hyperosmotic response RCA Interproscan
BP GO:0006979 response to oxidative stress IGI Interproscan
BP GO:0007030 Golgi organization RCA Interproscan
BP GO:0007154 cell communication RCA Interproscan
BP GO:0008219 cell death RCA Interproscan
BP GO:0009266 response to temperature stimulus RCA Interproscan
BP GO:0009409 response to cold RCA Interproscan
BP GO:0009414 response to water deprivation IMP Interproscan
BP GO:0009651 response to salt stress IMP Interproscan
BP GO:0009651 response to salt stress RCA Interproscan
BP GO:0009723 response to ethylene IMP Interproscan
BP GO:0009733 response to auxin RCA Interproscan
BP GO:0009737 response to abscisic acid RCA Interproscan
BP GO:0009738 abscisic acid-activated signaling pathway RCA Interproscan
BP GO:0009743 response to carbohydrate RCA Interproscan
BP GO:0009751 response to salicylic acid RCA Interproscan
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway RCA Interproscan
BP GO:0009863 salicylic acid mediated signaling pathway RCA Interproscan
BP GO:0009867 jasmonic acid mediated signaling pathway IMP Interproscan
BP GO:0009867 jasmonic acid mediated signaling pathway RCA Interproscan
BP GO:0009873 ethylene-activated signaling pathway IMP Interproscan
BP GO:0009873 ethylene-activated signaling pathway RCA Interproscan
BP GO:0010102 lateral root morphogenesis IMP Interproscan
BP GO:0010193 response to ozone IMP Interproscan
BP GO:0010363 regulation of plant-type hypersensitive response RCA Interproscan
BP GO:0012501 programmed cell death IMP Interproscan
BP GO:0016192 vesicle-mediated transport RCA Interproscan
BP GO:0030968 endoplasmic reticulum unfolded protein response RCA Interproscan
BP GO:0031348 negative regulation of defense response RCA Interproscan
BP GO:0043069 negative regulation of programmed cell death RCA Interproscan
BP GO:0046686 response to cadmium ion RCA Interproscan
BP GO:0048193 Golgi vesicle transport RCA Interproscan
BP GO:0050832 defense response to fungus RCA Interproscan
BP GO:2000377 regulation of reactive oxygen species metabolic process IMP Interproscan
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000212 meiotic spindle organization IEP HCCA
CC GO:0000932 P-body IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004630 phospholipase D activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0005034 osmosensor activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009685 gibberellin metabolic process IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0009736 cytokinin-activated signaling pathway IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
MF GO:0009884 cytokinin receptor activity IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0009968 negative regulation of signal transduction IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010029 regulation of seed germination IEP HCCA
BP GO:0010039 response to iron ion IEP HCCA
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010105 negative regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
BP GO:0010225 response to UV-C IEP HCCA
BP GO:0010271 regulation of chlorophyll catabolic process IEP HCCA
BP GO:0010374 stomatal complex development IEP HCCA
BP GO:0010648 negative regulation of cell communication IEP HCCA
BP GO:0010959 regulation of metal ion transport IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
BP GO:0016036 cellular response to phosphate starvation IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016101 diterpenoid metabolic process IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
MF GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0017050 D-erythro-sphingosine kinase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0023057 negative regulation of signaling IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
BP GO:0031329 regulation of cellular catabolic process IEP HCCA
BP GO:0031537 regulation of anthocyanin metabolic process IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0032870 cellular response to hormone stimulus IEP HCCA
MF GO:0033549 MAP kinase phosphatase activity IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
BP GO:0034756 regulation of iron ion transport IEP HCCA
BP GO:0034757 negative regulation of iron ion transport IEP HCCA
CC GO:0035770 ribonucleoprotein granule IEP HCCA
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043271 negative regulation of monoatomic ion transport IEP HCCA
MF GO:0043424 protein histidine kinase binding IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0048506 regulation of timing of meristematic phase transition IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0051051 negative regulation of transport IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0070297 regulation of phosphorelay signal transduction system IEP HCCA
BP GO:0070298 negative regulation of phosphorelay signal transduction system IEP HCCA
MF GO:0070300 phosphatidic acid binding IEP HCCA
BP GO:0070417 cellular response to cold IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071215 cellular response to abscisic acid stimulus IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071241 cellular response to inorganic substance IEP HCCA
BP GO:0071248 cellular response to metal ion IEP HCCA
BP GO:0071281 cellular response to iron ion IEP HCCA
BP GO:0071310 cellular response to organic substance IEP HCCA
BP GO:0071322 cellular response to carbohydrate stimulus IEP HCCA
BP GO:0071324 cellular response to disaccharide stimulus IEP HCCA
BP GO:0071329 cellular response to sucrose stimulus IEP HCCA
BP GO:0071396 cellular response to lipid IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:0071495 cellular response to endogenous stimulus IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0080117 secondary growth IEP HCCA
BP GO:0080190 lateral growth IEP HCCA
BP GO:0090056 regulation of chlorophyll metabolic process IEP HCCA
BP GO:0090306 meiotic spindle assembly IEP HCCA
BP GO:0090558 plant epidermis development IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:0097306 cellular response to alcohol IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1900140 regulation of seedling development IEP HCCA
BP GO:1901401 regulation of tetrapyrrole metabolic process IEP HCCA
BP GO:1901404 regulation of tetrapyrrole catabolic process IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1902532 negative regulation of intracellular signal transduction IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000035 regulation of stem cell division IEP HCCA
BP GO:2000069 regulation of post-embryonic root development IEP HCCA
BP GO:2000280 regulation of root development IEP HCCA
InterPro domains Description Start Stop
IPR022003 RST 502 567
IPR012317 Poly(ADP-ribose)pol_cat_dom 320 407
No external refs found!