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  5. Pnu_g26094

Pnu_g26094


Description : not classified & original description: none


Gene families : OG0005584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g26094
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT1G51110 No alias Plastid-lipid associated protein PAP / fibrillin family protein 0.07 OrthoFinder output from all 47 species
Adi_g006512 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g13580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25037.t1 Aspi01Gene25037 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0315.g064307 No alias not classified & original description: CDS=129-1313 0.04 OrthoFinder output from all 47 species
Cba_g29671 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.18G084800.1 Ceric.18G084800 not classified & original description: pacid=50622462... 0.03 OrthoFinder output from all 47 species
Cre03.g176350 No alias Probable plastid-lipid-associated protein 12,... 0.01 OrthoFinder output from all 47 species
Dac_g13863 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g04559 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19599 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01025367001 No alias Probable plastid-lipid-associated protein 12,... 0.04 OrthoFinder output from all 47 species
Gb_09730 No alias Probable plastid-lipid-associated protein 12,... 0.04 OrthoFinder output from all 47 species
LOC_Os07g28790.1 LOC_Os07g28790 Probable plastid-lipid-associated protein 12,... 0.03 OrthoFinder output from all 47 species
Len_g13850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_5934993g0010 No alias Probable plastid-lipid-associated protein 12,... 0.05 OrthoFinder output from all 47 species
Nbi_g26346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45226 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g04696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g10823 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g006330.4.1 Solyc01g006330 Probable plastid-lipid-associated protein 12,... 0.04 OrthoFinder output from all 47 species
Zm00001e034859_P002 Zm00001e034859 Probable plastid-lipid-associated protein 12,... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 78 256
IPR006843 PAP/fibrillin_dom 274 409
No external refs found!