Pnu_g10075


Description : not classified & original description: none


Gene families : OG0002174 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0002174_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g10075
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Ala_g02382 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Als_g09651 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Azfi_s0072.g036902 No alias not classified & original description: CDS=1-1971 0.02 OrthoFinder output from all 39 species
Ehy_g10737 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
LOC_Os02g06300.1 LOC_Os02g06300 Translation factor GUF1 homolog, chloroplastic OS=Oryza... 0.01 OrthoFinder output from all 39 species
Lfl_g03115 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Nbi_g19015 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g18021 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Sam_g39971 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Spa_g04229 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Zm00001e025200_P002 Zm00001e025200 Translation factor GUF1 homolog, chloroplastic OS=Oryza... 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 136 314
IPR013842 LepA_CTD 621 727
IPR004161 EFTu-like_2 338 408
IPR000640 EFG_V-like 532 618
No external refs found!