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  5. Pnu_g10075

Pnu_g10075


Description : not classified & original description: none


Gene families : OG0002290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g10075
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00109510 evm_27.TU.AmTr_v1... Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera 0.06 OrthoFinder output from all 47 species
AT5G08650 No alias Small GTP-binding protein 0.1 OrthoFinder output from all 47 species
Adi_g116309 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g19322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09651 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43914.t1 Aspi01Gene43914 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0072.g036902 No alias not classified & original description: CDS=1-1971 0.07 OrthoFinder output from all 47 species
Ceric.02G059400.1 Ceric.02G059400 not classified & original description: pacid=50584081... 0.05 OrthoFinder output from all 47 species
Cre03.g165000 No alias Translation factor GUF1 homolog, chloroplastic... 0.02 OrthoFinder output from all 47 species
Dde_g11300 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01022409001 No alias Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
LOC_Os02g06300.1 LOC_Os02g06300 Translation factor GUF1 homolog, chloroplastic OS=Oryza... 0.06 OrthoFinder output from all 47 species
Mp7g18810.1 No alias Translation factor GUF1 homolog, chloroplastic OS=Vitis... 0.05 OrthoFinder output from all 47 species
Msp_g11300 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g19015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18021 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pp3c2_35906V3.1 Pp3c2_35906 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g43097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g39971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo163486 No alias Translation factor GUF1 homolog, chloroplastic OS=Oryza... 0.02 OrthoFinder output from all 47 species
Smo407721 No alias Translation factor GUF1 homolog, chloroplastic OS=Oryza... 0.02 OrthoFinder output from all 47 species
Solyc04g015450.3.1 Solyc04g015450 Translation factor GUF1 homolog, chloroplastic... 0.07 OrthoFinder output from all 47 species
Spa_g04229 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e025200_P002 Zm00001e025200 Translation factor GUF1 homolog, chloroplastic OS=Oryza... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 136 314
IPR013842 LepA_CTD 621 727
IPR004161 EFTu-like_2 338 408
IPR000640 EFG_V-like 532 618
No external refs found!