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  5. Cba_g67032

Cba_g67032 (emb1579)


Aliases : emb1579

Description : not classified & original description: none


Gene families : OG0003544 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003544_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g67032

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00266660 emb1579,... No description available 0.02 OrthoFinder output from all 47 species
AT2G03150 emb1579 ATP/GTP-binding protein family 0.04 OrthoFinder output from all 47 species
Adi_g010843 emb1579 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g47806 emb1579 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000863.29 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre06.g283634 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01019950001 emb1579 No description available 0.04 OrthoFinder output from all 47 species
Gb_35997 emb1579 no description available(sp|f4is91|rsa1_arath : 258.0) 0.04 OrthoFinder output from all 47 species
Lfl_g16958 emb1579 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g37611 emb1579 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e030655_P003 emb1579, Zm00001e030655 no description available(sp|f4is91|rsa1_arath : 304.0) 0.04 OrthoFinder output from all 47 species
Zm00001e037178_P001 emb1579, Zm00001e037178 no description available(sp|f4is91|rsa1_arath : 313.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025954 DBC1/CARP1_inactive_NUDIX_dom 550 667
IPR045354 BURAN 444 529
IPR045353 LAIKA 847 907
No external refs found!