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  5. Cba_g51300

Cba_g51300 (GCP1)


Aliases : GCP1

Description : mitochondrial tRNA threonylcarbamoyl transferase & original description: none


Gene families : OG0004465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g51300
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
AT2G45270 GCP1 glycoprotease 1 0.02 OrthoFinder output from all 47 species
Ceric.01G078900.1 GCP1, Ceric.01G078900 mitochondrial tRNA threonylcarbamoyl transferase &... 0.03 OrthoFinder output from all 47 species
LOC_Os12g29990.1 GCP1, LOC_Os12g29990 mitochondrial tRNA threonylcarbamoyl transferase 0.02 OrthoFinder output from all 47 species
Nbi_g26139 GCP1 mitochondrial tRNA threonylcarbamoyl transferase &... 0.03 OrthoFinder output from all 47 species
Sam_g40017 No alias mitochondrial tRNA threonylcarbamoyl transferase &... 0.04 OrthoFinder output from all 47 species
Spa_g16171 GCP1 mitochondrial tRNA threonylcarbamoyl transferase &... 0.03 OrthoFinder output from all 47 species
Tin_g27952 GCP1 mitochondrial tRNA threonylcarbamoyl transferase &... 0.03 OrthoFinder output from all 47 species
Zm00001e017458_P002 GCP1, Zm00001e017458 mitochondrial tRNA threonylcarbamoyl transferase 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR000905 Gcp-like_dom 110 422
No external refs found!