Coexpression cluster: Cluster_40 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0019843 rRNA binding 13.21% (7/53) 7.67 0.0 0.0
GO:0016984 ribulose-bisphosphate carboxylase activity 9.43% (5/53) 8.77 0.0 0.0
GO:0015977 carbon fixation 9.43% (5/53) 8.03 0.0 0.0
GO:0043604 amide biosynthetic process 16.98% (9/53) 4.45 0.0 0.0
GO:0006518 peptide metabolic process 16.98% (9/53) 4.43 0.0 0.0
GO:0043603 amide metabolic process 16.98% (9/53) 4.4 0.0 0.0
GO:0043043 peptide biosynthetic process 16.98% (9/53) 4.46 0.0 0.0
GO:0003735 structural constituent of ribosome 16.98% (9/53) 4.48 0.0 0.0
GO:0005198 structural molecule activity 16.98% (9/53) 4.36 0.0 0.0
GO:0006412 translation 16.98% (9/53) 4.5 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 18.87% (10/53) 3.95 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 16.98% (9/53) 4.22 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 18.87% (10/53) 3.82 0.0 0.0
GO:0016831 carboxy-lyase activity 9.43% (5/53) 6.35 0.0 0.0
GO:0009059 macromolecule biosynthetic process 16.98% (9/53) 3.85 0.0 0.0
GO:0016830 carbon-carbon lyase activity 9.43% (5/53) 6.01 0.0 0.0
GO:0051540 metal cluster binding 9.43% (5/53) 5.73 0.0 0.0
GO:0051536 iron-sulfur cluster binding 9.43% (5/53) 5.73 0.0 0.0
GO:0000287 magnesium ion binding 9.43% (5/53) 5.73 0.0 0.0
GO:0003723 RNA binding 13.21% (7/53) 4.31 0.0 0.0
GO:0044249 cellular biosynthetic process 18.87% (10/53) 3.29 0.0 0.0
GO:0005840 ribosome 13.21% (7/53) 4.22 0.0 1e-06
GO:0044260 cellular macromolecule metabolic process 16.98% (9/53) 3.46 0.0 1e-06
GO:1901576 organic substance biosynthetic process 18.87% (10/53) 3.19 0.0 1e-06
GO:0043232 intracellular non-membrane-bounded organelle 13.21% (7/53) 4.0 0.0 1e-06
GO:0043228 non-membrane-bounded organelle 13.21% (7/53) 4.0 0.0 1e-06
GO:0009058 biosynthetic process 18.87% (10/53) 3.05 0.0 1e-06
GO:0034641 cellular nitrogen compound metabolic process 18.87% (10/53) 2.94 1e-06 2e-06
GO:0016829 lyase activity 9.43% (5/53) 4.61 2e-06 8e-06
GO:0043229 intracellular organelle 13.21% (7/53) 3.1 1.7e-05 6.2e-05
GO:0043226 organelle 13.21% (7/53) 3.1 1.7e-05 6.2e-05
GO:0071704 organic substance metabolic process 28.3% (15/53) 1.66 4.4e-05 0.000163
GO:0008152 metabolic process 28.3% (15/53) 1.55 0.000102 0.00036
GO:0003674 molecular_function 50.94% (27/53) 0.86 0.00036 0.00124
GO:1901564 organonitrogen compound metabolic process 18.87% (10/53) 1.66 0.001037 0.003466
GO:0019538 protein metabolic process 16.98% (9/53) 1.77 0.001151 0.00374
GO:0005488 binding 33.96% (18/53) 1.06 0.001224 0.003871
GO:0044237 cellular metabolic process 18.87% (10/53) 1.44 0.003292 0.010136
GO:0006807 nitrogen compound metabolic process 18.87% (10/53) 1.42 0.003501 0.010504
GO:0043170 macromolecule metabolic process 16.98% (9/53) 1.41 0.006109 0.017869
GO:0110165 cellular anatomical entity 13.21% (7/53) 1.66 0.006398 0.018257
GO:0003676 nucleic acid binding 13.21% (7/53) 1.6 0.00797 0.022203
GO:0055114 obsolete oxidation-reduction process 9.43% (5/53) 1.87 0.011751 0.031975
GO:0044238 primary metabolic process 18.87% (10/53) 1.13 0.013839 0.036799
GO:0046872 metal ion binding 9.43% (5/53) 1.7 0.018467 0.048015
GO:0043169 cation binding 9.43% (5/53) 1.69 0.019005 0.04834
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_9 0.017 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_123 0.108 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_59 0.025 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_177 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_214 0.017 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_60 0.098 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_17 0.017 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_62 0.045 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_57 0.015 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_83 0.019 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_126 0.026 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_182 0.077 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_95 0.029 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_9 0.016 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_18 0.02 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_87 0.064 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_12 0.035 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_54 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_18 0.018 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_26 0.018 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_42 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_43 0.087 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_44 0.015 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_45 0.104 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_58 0.042 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_66 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_68 0.03 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_73 0.015 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_98 0.058 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_100 0.068 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_120 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_134 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_136 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_137 0.03 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_314 0.038 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_29 0.017 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_81 0.017 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_171 0.055 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_10 0.017 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_34 0.018 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_9 0.017 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_18 0.03 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_22 0.061 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_66 0.052 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_73 0.018 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_105 0.015 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_175 0.059 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_27 0.122 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_8 0.02 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_31 0.038 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_62 0.077 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_7 0.047 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_121 0.113 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_8 0.05 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_118 0.021 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_99 0.026 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_129 0.018 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_17 0.05 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_174 0.021 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_299 0.026 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_83 0.02 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_131 0.016 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_151 0.033 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_31 0.042 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_3 0.051 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_4 0.06 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_5 0.054 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_96 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_143 0.019 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_26 0.089 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_80 0.047 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_207 0.048 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_30 0.024 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_84 0.034 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_27 0.026 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_26 0.016 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_126 0.016 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_140 0.039 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_141 0.022 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_172 0.016 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_178 0.019 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_185 0.017 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_74 0.056 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_88 0.017 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_108 0.079 OrthoFinder output from all 47 species Compare
Sequences (53) (download table)

InterPro Domains

GO Terms

Family Terms