Coexpression cluster: Cluster_9 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0019684 photosynthesis, light reaction 5.71% (4/70) 9.27 0.0 0.0
GO:0009767 photosynthetic electron transport chain 5.71% (4/70) 8.95 0.0 0.0
GO:0009055 electron transfer activity 7.14% (5/70) 5.07 0.0 1.8e-05
GO:0022900 electron transport chain 5.71% (4/70) 6.07 0.0 2.3e-05
GO:0016651 oxidoreductase activity, acting on NAD(P)H 4.29% (3/70) 7.4 1e-06 2.3e-05
GO:0006754 ATP biosynthetic process 5.71% (4/70) 5.6 1e-06 2.3e-05
GO:0009142 nucleoside triphosphate biosynthetic process 5.71% (4/70) 5.6 1e-06 2.3e-05
GO:0009201 ribonucleoside triphosphate biosynthetic process 5.71% (4/70) 5.6 1e-06 2.3e-05
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 5.71% (4/70) 5.6 1e-06 2.3e-05
GO:0015986 proton motive force-driven ATP synthesis 5.71% (4/70) 5.6 1e-06 2.3e-05
GO:0009145 purine nucleoside triphosphate biosynthetic process 5.71% (4/70) 5.6 1e-06 2.3e-05
GO:0046390 ribose phosphate biosynthetic process 5.71% (4/70) 5.39 3e-06 2.5e-05
GO:0009152 purine ribonucleotide biosynthetic process 5.71% (4/70) 5.39 3e-06 2.5e-05
GO:0009260 ribonucleotide biosynthetic process 5.71% (4/70) 5.39 3e-06 2.5e-05
GO:0009579 thylakoid 2.86% (2/70) 9.27 3e-06 2.9e-05
GO:0009772 photosynthetic electron transport in photosystem II 2.86% (2/70) 9.27 3e-06 2.9e-05
GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity 2.86% (2/70) 9.27 3e-06 2.9e-05
GO:0016168 chlorophyll binding 2.86% (2/70) 9.27 3e-06 2.9e-05
GO:0098796 membrane protein complex 8.57% (6/70) 3.86 4e-06 3.4e-05
GO:0006164 purine nucleotide biosynthetic process 5.71% (4/70) 5.21 4e-06 3.8e-05
GO:0072522 purine-containing compound biosynthetic process 5.71% (4/70) 5.19 5e-06 3.8e-05
GO:0009165 nucleotide biosynthetic process 5.71% (4/70) 5.1 6e-06 4.4e-05
GO:1901293 nucleoside phosphate biosynthetic process 5.71% (4/70) 5.1 6e-06 4.4e-05
GO:1901137 carbohydrate derivative biosynthetic process 5.71% (4/70) 4.99 8e-06 5.8e-05
GO:0034654 nucleobase-containing compound biosynthetic process 7.14% (5/70) 4.07 1.3e-05 8.6e-05
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 4.29% (3/70) 6.0 1.4e-05 9.4e-05
GO:0009144 purine nucleoside triphosphate metabolic process 5.71% (4/70) 4.53 2.8e-05 0.000152
GO:0009205 purine ribonucleoside triphosphate metabolic process 5.71% (4/70) 4.53 2.8e-05 0.000152
GO:0009199 ribonucleoside triphosphate metabolic process 5.71% (4/70) 4.53 2.8e-05 0.000152
GO:0046034 ATP metabolic process 5.71% (4/70) 4.53 2.8e-05 0.000152
GO:0090407 organophosphate biosynthetic process 5.71% (4/70) 4.59 2.4e-05 0.000155
GO:0019438 aromatic compound biosynthetic process 7.14% (5/70) 3.81 3e-05 0.000158
GO:0009141 nucleoside triphosphate metabolic process 5.71% (4/70) 4.49 3.2e-05 0.000159
GO:0006091 generation of precursor metabolites and energy 5.71% (4/70) 4.56 2.6e-05 0.000161
GO:0018130 heterocycle biosynthetic process 7.14% (5/70) 3.76 3.5e-05 0.000172
GO:1901362 organic cyclic compound biosynthetic process 7.14% (5/70) 3.65 5.1e-05 0.000222
GO:0009259 ribonucleotide metabolic process 5.71% (4/70) 4.32 5e-05 0.000227
GO:0009150 purine ribonucleotide metabolic process 5.71% (4/70) 4.32 5e-05 0.000227
GO:0019693 ribose phosphate metabolic process 5.71% (4/70) 4.32 5e-05 0.000227
GO:0006163 purine nucleotide metabolic process 5.71% (4/70) 4.19 7.2e-05 0.000294
GO:0072521 purine-containing compound metabolic process 5.71% (4/70) 4.18 7.4e-05 0.000296
GO:0016491 oxidoreductase activity 12.86% (9/70) 2.34 6.9e-05 0.000297
GO:0048038 quinone binding 2.86% (2/70) 7.27 7.1e-05 0.000298
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain 4.29% (3/70) 5.16 8.4e-05 0.000327
GO:0009117 nucleotide metabolic process 5.71% (4/70) 4.11 8.8e-05 0.000334
GO:0006753 nucleoside phosphate metabolic process 5.71% (4/70) 4.08 9.5e-05 0.000354
GO:0055086 nucleobase-containing small molecule metabolic process 5.71% (4/70) 3.95 0.000135 0.000493
GO:0006139 nucleobase-containing compound metabolic process 8.57% (6/70) 2.81 0.000222 0.00079
GO:0032991 protein-containing complex 8.57% (6/70) 2.78 0.000243 0.000846
GO:0019637 organophosphate metabolic process 5.71% (4/70) 3.71 0.000256 0.000876
GO:1901135 carbohydrate derivative metabolic process 5.71% (4/70) 3.66 0.000294 0.000949
GO:0044237 cellular metabolic process 18.57% (13/70) 1.6 0.000289 0.00095
GO:0016020 membrane 11.43% (8/70) 2.24 0.000287 0.000961
GO:0046483 heterocycle metabolic process 8.57% (6/70) 2.65 0.000402 0.001251
GO:0006725 cellular aromatic compound metabolic process 8.57% (6/70) 2.64 0.000413 0.001262
GO:0009521 photosystem 4.29% (3/70) 4.4 0.000401 0.001269
GO:1901360 organic cyclic compound metabolic process 8.57% (6/70) 2.6 0.000479 0.001437
GO:0015078 proton transmembrane transporter activity 4.29% (3/70) 4.27 0.000517 0.001525
GO:0005575 cellular_component 17.14% (12/70) 1.49 0.000993 0.002879
GO:0016984 ribulose-bisphosphate carboxylase activity 1.43% (1/70) 9.27 0.001615 0.004601
GO:0008152 metabolic process 20.0% (14/70) 1.25 0.001801 0.005049
GO:0022890 inorganic cation transmembrane transporter activity 4.29% (3/70) 3.54 0.002252 0.006212
GO:0008324 monoatomic cation transmembrane transporter activity 4.29% (3/70) 3.46 0.00263 0.007138
GO:0015318 inorganic molecular entity transmembrane transporter activity 4.29% (3/70) 3.42 0.002855 0.007629
GO:0015075 monoatomic ion transmembrane transporter activity 4.29% (3/70) 3.31 0.003548 0.009335
GO:0003955 NAD(P)H dehydrogenase (quinone) activity 1.43% (1/70) 7.69 0.004836 0.011985
GO:0050136 NADH dehydrogenase (quinone) activity 1.43% (1/70) 7.69 0.004836 0.011985
GO:0008137 NADH dehydrogenase (ubiquinone) activity 1.43% (1/70) 7.69 0.004836 0.011985
GO:0003954 NADH dehydrogenase activity 1.43% (1/70) 7.69 0.004836 0.011985
GO:0051287 NAD binding 2.86% (2/70) 4.15 0.005781 0.014122
GO:0044281 small molecule metabolic process 5.71% (4/70) 2.4 0.007014 0.016893
GO:0009987 cellular process 18.57% (13/70) 1.08 0.007417 0.017373
GO:0044271 cellular nitrogen compound biosynthetic process 8.57% (6/70) 1.81 0.007384 0.017536
GO:0034641 cellular nitrogen compound metabolic process 10.0% (7/70) 1.61 0.00797 0.018418
GO:0015979 photosynthesis 2.86% (2/70) 3.83 0.008799 0.020061
GO:0110165 cellular anatomical entity 12.86% (9/70) 1.33 0.009093 0.020459
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 1.43% (1/70) 6.69 0.009649 0.021153
GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity 1.43% (1/70) 6.69 0.009649 0.021153
GO:0003824 catalytic activity 20.0% (14/70) 0.96 0.011166 0.02417
GO:0044249 cellular biosynthetic process 8.57% (6/70) 1.58 0.015281 0.032662
GO:0022857 transmembrane transporter activity 5.71% (4/70) 2.01 0.017507 0.03696
GO:1901576 organic substance biosynthetic process 8.57% (6/70) 1.52 0.018316 0.037735
GO:0005215 transporter activity 5.71% (4/70) 1.99 0.018265 0.03809
GO:0140103 catalytic activity, acting on a glycoprotein 1.43% (1/70) 5.69 0.019206 0.039098
GO:0009058 biosynthetic process 8.57% (6/70) 1.45 0.022736 0.045739
GO:0003674 molecular_function 34.29% (24/70) 0.56 0.02328 0.04629
GO:1901566 organonitrogen compound biosynthetic process 7.14% (5/70) 1.62 0.02362 0.046425
GO:0015453 oxidoreduction-driven active transmembrane transporter activity 1.43% (1/70) 5.27 0.025527 0.049603
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_123 0.018 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_137 0.017 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_197 0.017 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_8 0.017 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_68 0.019 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_98 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_276 0.015 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_480 0.016 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_60 0.163 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_62 0.05 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_116 0.023 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_57 0.037 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_83 0.045 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_182 0.058 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_233 0.015 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_25 0.018 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_29 0.021 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_95 0.023 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_206 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_252 0.015 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_253 0.017 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_18 0.03 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_84 0.02 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_87 0.136 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_12 0.038 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_166 0.023 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_8 0.015 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_18 0.015 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_24 0.035 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_25 0.025 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_26 0.042 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_38 0.026 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_43 0.156 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_44 0.025 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_50 0.024 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_60 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_68 0.036 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_69 0.024 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_84 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_88 0.025 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_89 0.027 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_96 0.025 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_98 0.059 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_99 0.023 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_100 0.049 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_122 0.034 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_137 0.024 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_23 0.027 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_81 0.085 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_124 0.019 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_180 0.016 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_34 0.048 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_24 0.015 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_20 0.027 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_22 0.061 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_66 0.068 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_73 0.027 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_79 0.023 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_166 0.022 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_44 0.015 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_175 0.06 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_27 0.125 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_28 0.018 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_135 0.017 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_72 0.016 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_101 0.016 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_22 0.016 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_31 0.06 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_46 0.015 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_62 0.058 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_83 0.024 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_91 0.016 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_96 0.015 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_152 0.016 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_7 0.037 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_121 0.129 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_54 0.02 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_114 0.018 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_8 0.017 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_186 0.022 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_230 0.027 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_51 0.015 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_80 0.016 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_92 0.052 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_17 0.035 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_80 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_195 0.019 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_299 0.056 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_83 0.046 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_97 0.015 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_131 0.025 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_151 0.111 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_14 0.016 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_31 0.071 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_3 0.074 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_4 0.148 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_41 0.019 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_75 0.019 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_89 0.054 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_98 0.018 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_138 0.024 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_25 0.02 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_26 0.114 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_76 0.023 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_80 0.069 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_127 0.017 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_162 0.023 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_202 0.029 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_207 0.07 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_30 0.017 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_39 0.017 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_84 0.058 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_108 0.015 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_20 0.03 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_25 0.026 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_27 0.033 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_42 0.024 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_55 0.027 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_58 0.018 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_40 0.017 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_41 0.075 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_131 0.024 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_141 0.016 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_32 0.017 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_74 0.136 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_108 0.049 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_114 0.017 OrthoFinder output from all 47 species Compare
Sequences (70) (download table)

InterPro Domains

GO Terms

Family Terms