Coexpression cluster: Cluster_54 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003735 structural constituent of ribosome 59.52% (25/42) 6.46 0.0 0.0
GO:0005198 structural molecule activity 59.52% (25/42) 6.36 0.0 0.0
GO:0006412 translation 57.14% (24/42) 6.42 0.0 0.0
GO:0043043 peptide biosynthetic process 57.14% (24/42) 6.38 0.0 0.0
GO:0043604 amide biosynthetic process 57.14% (24/42) 6.35 0.0 0.0
GO:0006518 peptide metabolic process 57.14% (24/42) 6.34 0.0 0.0
GO:0043603 amide metabolic process 57.14% (24/42) 6.32 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 57.14% (24/42) 6.3 0.0 0.0
GO:0005840 ribosome 54.76% (23/42) 6.4 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 54.76% (23/42) 6.21 0.0 0.0
GO:0043228 non-membrane-bounded organelle 54.76% (23/42) 6.21 0.0 0.0
GO:0009059 macromolecule biosynthetic process 57.14% (24/42) 5.8 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 57.14% (24/42) 5.49 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 57.14% (24/42) 5.27 0.0 0.0
GO:0043229 intracellular organelle 54.76% (23/42) 5.25 0.0 0.0
GO:0043226 organelle 54.76% (23/42) 5.25 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 57.14% (24/42) 4.82 0.0 0.0
GO:0044249 cellular biosynthetic process 57.14% (24/42) 4.52 0.0 0.0
GO:1901576 organic substance biosynthetic process 57.14% (24/42) 4.43 0.0 0.0
GO:0009058 biosynthetic process 57.14% (24/42) 4.3 0.0 0.0
GO:0005622 intracellular anatomical structure 35.71% (15/42) 6.2 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 57.14% (24/42) 3.91 0.0 0.0
GO:0110165 cellular anatomical entity 57.14% (24/42) 3.87 0.0 0.0
GO:0005575 cellular_component 59.52% (25/42) 3.42 0.0 0.0
GO:0019538 protein metabolic process 57.14% (24/42) 3.35 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 57.14% (24/42) 3.09 0.0 0.0
GO:0043170 macromolecule metabolic process 57.14% (24/42) 2.93 0.0 0.0
GO:0044237 cellular metabolic process 57.14% (24/42) 2.75 0.0 0.0
GO:0006807 nitrogen compound metabolic process 57.14% (24/42) 2.65 0.0 0.0
GO:0009987 cellular process 61.9% (26/42) 2.39 0.0 0.0
GO:0044238 primary metabolic process 57.14% (24/42) 2.52 0.0 0.0
GO:0071704 organic substance metabolic process 57.14% (24/42) 2.46 0.0 0.0
GO:0008152 metabolic process 57.14% (24/42) 2.33 0.0 0.0
GO:0008150 biological_process 61.9% (26/42) 1.96 0.0 0.0
GO:0003674 molecular_function 64.29% (27/42) 1.24 1e-06 1e-06
GO:0019843 rRNA binding 4.76% (2/42) 6.92 0.000114 0.000187
GO:0003723 RNA binding 9.52% (4/42) 3.69 0.000256 0.000408
GO:0003676 nucleic acid binding 14.29% (6/42) 2.01 0.003484 0.005409
GO:0015934 large ribosomal subunit 2.38% (1/42) 7.14 0.007086 0.010197
GO:0008079 translation termination factor activity 2.38% (1/42) 7.14 0.007086 0.010197
GO:0003747 translation release factor activity 2.38% (1/42) 7.14 0.007086 0.010197
GO:0044391 ribosomal subunit 2.38% (1/42) 6.72 0.009437 0.012373
GO:0032984 protein-containing complex disassembly 2.38% (1/42) 6.72 0.009437 0.012373
GO:0022411 cellular component disassembly 2.38% (1/42) 6.72 0.009437 0.012373
GO:0006415 translational termination 2.38% (1/42) 6.72 0.009437 0.012373
GO:0071840 cellular component organization or biogenesis 4.76% (2/42) 3.05 0.024274 0.031134
GO:0042254 ribosome biogenesis 2.38% (1/42) 5.26 0.025743 0.031642
GO:0022613 ribonucleoprotein complex biogenesis 2.38% (1/42) 5.26 0.025743 0.031642
GO:0044085 cellular component biogenesis 2.38% (1/42) 5.14 0.02805 0.033775
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_8 0.016 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_24 0.019 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_173 0.082 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_7 0.034 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_214 0.025 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_253 0.033 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_260 0.038 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_274 0.021 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_371 0.023 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_68 0.03 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_96 0.031 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_155 0.022 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_62 0.015 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_74 0.051 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_115 0.02 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_39 0.057 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_126 0.041 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_37 0.027 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_213 0.03 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_257 0.045 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_36 0.117 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_58 0.016 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_136 0.015 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_140 0.017 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_167 0.018 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_191 0.018 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_305 0.016 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_322 0.066 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_119 0.046 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_95 0.024 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_8 0.049 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_10 0.025 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_32 0.04 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_288 0.031 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_73 0.064 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_43 0.019 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_68 0.023 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_126 0.163 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_137 0.023 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_15 0.016 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_28 0.027 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_122 0.059 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_12 0.019 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_25 0.073 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_8 0.043 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_114 0.035 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_119 0.022 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_185 0.027 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_5 0.034 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_15 0.02 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_34 0.02 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_88 0.03 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_125 0.063 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_24 0.016 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_43 0.095 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_116 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_3 0.019 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_6 0.096 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_27 0.027 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_32 0.019 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_124 0.022 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_158 0.016 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_1 0.023 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_34 0.016 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_60 0.032 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_106 0.03 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_166 0.018 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_32 0.018 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_66 0.183 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_7 0.111 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_36 0.025 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_127 0.021 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_140 0.062 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_11 0.036 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_59 0.226 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_121 0.021 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_130 0.024 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_100 0.052 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_147 0.063 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_210 0.024 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_5 0.031 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_40 0.019 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_136 0.015 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_143 0.019 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_226 0.025 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_4 0.02 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_10 0.017 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_14 0.015 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_99 0.043 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_109 0.035 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_28 0.144 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_11 0.019 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_20 0.028 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_50 0.019 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_62 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_139 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_155 0.015 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_213 0.071 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_222 0.02 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_51 0.033 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_75 0.031 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_133 0.07 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_144 0.039 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_78 0.042 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_58 0.053 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_90 0.113 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_2 0.037 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_26 0.021 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_13 0.028 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_79 0.144 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_40 0.016 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_114 0.146 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_140 0.02 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_5 0.021 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_37 0.015 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_81 0.307 OrthoFinder output from all 47 species Compare
Sequences (42) (download table)

InterPro Domains

GO Terms

Family Terms