Coexpression cluster: Cluster_28 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005198 structural molecule activity 18.07% (15/83) 4.51 0.0 0.0
GO:0003735 structural constituent of ribosome 18.07% (15/83) 4.56 0.0 0.0
GO:0043603 amide metabolic process 16.87% (14/83) 4.45 0.0 0.0
GO:0043228 non-membrane-bounded organelle 16.87% (14/83) 4.45 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 16.87% (14/83) 4.45 0.0 0.0
GO:0006518 peptide metabolic process 16.87% (14/83) 4.45 0.0 0.0
GO:0005840 ribosome 16.87% (14/83) 4.54 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 16.87% (14/83) 4.42 0.0 0.0
GO:0006412 translation 16.87% (14/83) 4.48 0.0 0.0
GO:0043604 amide biosynthetic process 16.87% (14/83) 4.48 0.0 0.0
GO:0043043 peptide biosynthetic process 16.87% (14/83) 4.48 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 18.07% (15/83) 4.32 0.0 0.0
GO:0043229 intracellular organelle 16.87% (14/83) 4.17 0.0 0.0
GO:0043226 organelle 16.87% (14/83) 4.16 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 16.87% (14/83) 4.05 0.0 0.0
GO:0009059 macromolecule biosynthetic process 16.87% (14/83) 4.02 0.0 0.0
GO:0044249 cellular biosynthetic process 18.07% (15/83) 3.81 0.0 0.0
GO:1901576 organic substance biosynthetic process 18.07% (15/83) 3.78 0.0 0.0
GO:0009058 biosynthetic process 18.07% (15/83) 3.74 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 16.87% (14/83) 3.94 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 18.07% (15/83) 3.6 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 19.28% (16/83) 3.28 0.0 0.0
GO:0110165 cellular anatomical entity 16.87% (14/83) 3.52 0.0 0.0
GO:0044237 cellular metabolic process 20.48% (17/83) 2.94 0.0 0.0
GO:0019538 protein metabolic process 16.87% (14/83) 3.35 0.0 0.0
GO:0071704 organic substance metabolic process 20.48% (17/83) 2.81 0.0 0.0
GO:0006807 nitrogen compound metabolic process 19.28% (16/83) 2.93 0.0 0.0
GO:0009987 cellular process 21.69% (18/83) 2.63 0.0 0.0
GO:0043170 macromolecule metabolic process 18.07% (15/83) 3.0 0.0 0.0
GO:0005575 cellular_component 16.87% (14/83) 3.06 0.0 0.0
GO:0044238 primary metabolic process 19.28% (16/83) 2.78 0.0 0.0
GO:0008152 metabolic process 20.48% (17/83) 2.66 0.0 0.0
GO:0008150 biological_process 21.69% (18/83) 2.27 0.0 0.0
GO:0003674 molecular_function 24.1% (20/83) 1.76 1e-06 3e-06
GO:0016853 isomerase activity 3.61% (3/83) 4.67 0.000226 0.000652
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 2.41% (2/83) 5.22 0.001315 0.003588
GO:0016859 cis-trans isomerase activity 2.41% (2/83) 5.22 0.001315 0.003588
GO:0016874 ligase activity 2.41% (2/83) 4.4 0.00406 0.01079
GO:0006520 amino acid metabolic process 2.41% (2/83) 4.0 0.007028 0.018201
GO:0009052 pentose-phosphate shunt, non-oxidative branch 1.2% (1/83) 6.61 0.01019 0.025102
GO:0004751 ribose-5-phosphate isomerase activity 1.2% (1/83) 6.61 0.01019 0.025102
GO:0004356 glutamate-ammonia ligase activity 1.2% (1/83) 6.29 0.012721 0.027932
GO:0006541 glutamine metabolic process 1.2% (1/83) 6.29 0.012721 0.027932
GO:0006542 glutamine biosynthetic process 1.2% (1/83) 6.29 0.012721 0.027932
GO:0016211 ammonia ligase activity 1.2% (1/83) 6.29 0.012721 0.027932
GO:0016880 acid-ammonia (or amide) ligase activity 1.2% (1/83) 6.29 0.012721 0.027932
GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses 1.2% (1/83) 6.03 0.015246 0.032763
GO:0006082 organic acid metabolic process 2.41% (2/83) 3.25 0.018798 0.037971
GO:0043436 oxoacid metabolic process 2.41% (2/83) 3.25 0.018798 0.037971
GO:0019752 carboxylic acid metabolic process 2.41% (2/83) 3.25 0.018798 0.037971
GO:0009064 glutamine family amino acid metabolic process 1.2% (1/83) 5.61 0.020277 0.039385
GO:0009084 glutamine family amino acid biosynthetic process 1.2% (1/83) 5.61 0.020277 0.039385
GO:0016860 intramolecular oxidoreductase activity 1.2% (1/83) 5.44 0.022783 0.043417
GO:0042254 ribosome biogenesis 1.2% (1/83) 5.29 0.025283 0.046428
GO:0022613 ribonucleoprotein complex biogenesis 1.2% (1/83) 5.29 0.025283 0.046428
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_173 0.041 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_7 0.019 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_260 0.02 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_274 0.017 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_68 0.026 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_96 0.036 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_74 0.038 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_39 0.035 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_126 0.03 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_213 0.02 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_257 0.024 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_36 0.071 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_322 0.023 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_119 0.021 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_8 0.034 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_10 0.026 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_288 0.015 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_73 0.026 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_28 0.021 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_54 0.144 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_126 0.105 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_28 0.034 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_122 0.025 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_25 0.048 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_8 0.039 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_114 0.034 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_24 0.03 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_125 0.038 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_43 0.047 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_6 0.046 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_22 0.021 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_60 0.015 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_106 0.02 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_32 0.03 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_66 0.095 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_7 0.063 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_163 0.017 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_127 0.017 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_140 0.034 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_39 0.028 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_59 0.122 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_142 0.016 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_147 0.05 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_210 0.025 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_5 0.036 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_274 0.023 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_96 0.018 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_23 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_20 0.035 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_213 0.045 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_7 0.017 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_51 0.028 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_133 0.046 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_78 0.039 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_43 0.016 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_58 0.026 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_90 0.082 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_2 0.02 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_79 0.087 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_114 0.07 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_81 0.147 OrthoFinder output from all 47 species Compare
Sequences (83) (download table)

InterPro Domains

GO Terms

Family Terms