Coexpression cluster: Cluster_23 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901566 organonitrogen compound biosynthetic process 5.41% (6/111) 2.58 0.000536 0.010265
GO:0006807 nitrogen compound metabolic process 9.01% (10/111) 1.83 0.000521 0.011626
GO:0044283 small molecule biosynthetic process 2.7% (3/111) 4.35 0.000435 0.011652
GO:0071704 organic substance metabolic process 9.91% (11/111) 1.76 0.000414 0.013859
GO:1901564 organonitrogen compound metabolic process 8.11% (9/111) 2.03 0.000382 0.017073
GO:0008152 metabolic process 10.81% (12/111) 1.73 0.000269 0.017997
GO:0044237 cellular metabolic process 9.91% (11/111) 1.89 0.000196 0.026237
GO:0009987 cellular process 9.91% (11/111) 1.5 0.00183 0.027247
GO:0008652 amino acid biosynthetic process 1.8% (2/111) 5.02 0.001711 0.028658
GO:0008150 biological_process 10.81% (12/111) 1.27 0.004198 0.031251
GO:1901576 organic substance biosynthetic process 5.41% (6/111) 2.04 0.003512 0.031377
GO:0009976 tocopherol cyclase activity 0.9% (1/111) 8.19 0.00342 0.032732
GO:0004358 glutamate N-acetyltransferase activity 0.9% (1/111) 8.19 0.00342 0.032732
GO:0009349 riboflavin synthase complex 0.9% (1/111) 8.19 0.00342 0.032732
GO:0009975 cyclase activity 0.9% (1/111) 8.19 0.00342 0.032732
GO:0044238 primary metabolic process 8.11% (9/111) 1.53 0.004197 0.033084
GO:0009058 biosynthetic process 5.41% (6/111) 2.0 0.004109 0.034414
GO:0009231 riboflavin biosynthetic process 0.9% (1/111) 7.19 0.006828 0.035191
GO:0006547 histidine metabolic process 0.9% (1/111) 7.19 0.006828 0.035191
GO:0006771 riboflavin metabolic process 0.9% (1/111) 7.19 0.006828 0.035191
GO:0000105 histidine biosynthetic process 0.9% (1/111) 7.19 0.006828 0.035191
GO:0042727 flavin-containing compound biosynthetic process 0.9% (1/111) 7.19 0.006828 0.035191
GO:0042726 flavin-containing compound metabolic process 0.9% (1/111) 7.19 0.006828 0.035191
GO:0046394 carboxylic acid biosynthetic process 1.8% (2/111) 4.24 0.005051 0.035626
GO:0016053 organic acid biosynthetic process 1.8% (2/111) 4.1 0.006054 0.04056
GO:0044249 cellular biosynthetic process 5.41% (6/111) 2.07 0.003164 0.042404
GO:0016853 isomerase activity 1.8% (2/111) 3.67 0.010875 0.044159
GO:0032296 double-stranded RNA-specific ribonuclease activity 0.9% (1/111) 6.61 0.010225 0.044197
GO:0006526 arginine biosynthetic process 0.9% (1/111) 6.61 0.010225 0.044197
GO:0006525 arginine metabolic process 0.9% (1/111) 6.61 0.010225 0.044197
GO:0004525 ribonuclease III activity 0.9% (1/111) 6.61 0.010225 0.044197
GO:0019538 protein metabolic process 5.41% (6/111) 1.71 0.010582 0.044313
GO:0004751 ribose-5-phosphate isomerase activity 0.9% (1/111) 6.19 0.01361 0.044481
GO:0006766 vitamin metabolic process 0.9% (1/111) 6.19 0.01361 0.044481
GO:0009052 pentose-phosphate shunt, non-oxidative branch 0.9% (1/111) 6.19 0.01361 0.044481
GO:0009110 vitamin biosynthetic process 0.9% (1/111) 6.19 0.01361 0.044481
GO:0006767 water-soluble vitamin metabolic process 0.9% (1/111) 6.19 0.01361 0.044481
GO:0042364 water-soluble vitamin biosynthetic process 0.9% (1/111) 6.19 0.01361 0.044481
GO:0044281 small molecule metabolic process 2.7% (3/111) 2.8 0.009343 0.046368
GO:0006520 amino acid metabolic process 1.8% (2/111) 3.58 0.012275 0.048377
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amblovenatum opulentum HCCA Cluster_322 0.019 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_126 0.02 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_274 0.018 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_28 0.016 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_78 0.016 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_13 0.019 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_114 0.021 OrthoFinder output from all 47 species Compare
Sequences (111) (download table)

InterPro Domains

GO Terms

Family Terms