Coexpression cluster: Cluster_28 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009521 photosystem 16.25% (13/80) 6.69 0.0 0.0
GO:0015979 photosynthesis 16.25% (13/80) 6.59 0.0 0.0
GO:0009522 photosystem I 11.25% (9/80) 7.79 0.0 0.0
GO:0098796 membrane protein complex 17.5% (14/80) 5.09 0.0 0.0
GO:0009538 photosystem I reaction center 6.25% (5/80) 7.79 0.0 0.0
GO:0032991 protein-containing complex 17.5% (14/80) 3.18 0.0 0.0
GO:0009654 photosystem II oxygen evolving complex 5.0% (4/80) 5.71 1e-06 1.5e-05
GO:0009523 photosystem II 5.0% (4/80) 5.54 1e-06 2.1e-05
GO:1990204 oxidoreductase complex 5.0% (4/80) 5.33 3e-06 3.4e-05
GO:0005575 cellular_component 18.75% (15/80) 1.75 3.1e-05 0.00036
GO:0004683 calmodulin-dependent protein kinase activity 2.5% (2/80) 7.21 6e-05 0.000639
GO:0010207 photosystem II assembly 2.5% (2/80) 6.47 0.000199 0.001941
GO:0005516 calmodulin binding 2.5% (2/80) 6.21 0.000298 0.002679
GO:0004674 protein serine/threonine kinase activity 2.5% (2/80) 5.79 0.000552 0.004617
GO:1902494 catalytic complex 5.0% (4/80) 3.21 0.00093 0.007252
GO:0019898 extrinsic component of membrane 2.5% (2/80) 4.99 0.001764 0.012901
GO:0009987 cellular process 23.75% (19/80) 1.01 0.002093 0.014405
GO:0044237 cellular metabolic process 18.75% (15/80) 1.15 0.00266 0.017288
GO:0034357 photosynthetic membrane 1.25% (1/80) 7.79 0.004509 0.021104
GO:0042651 thylakoid membrane 1.25% (1/80) 7.79 0.004509 0.021104
GO:0010109 regulation of photosynthesis 1.25% (1/80) 7.79 0.004509 0.021104
GO:0010242 oxygen evolving activity 1.25% (1/80) 7.79 0.004509 0.021104
GO:0042548 regulation of photosynthesis, light reaction 1.25% (1/80) 7.79 0.004509 0.021104
GO:0042549 photosystem II stabilization 1.25% (1/80) 7.79 0.004509 0.021104
GO:0043467 regulation of generation of precursor metabolites and energy 1.25% (1/80) 7.79 0.004509 0.021104
GO:0065003 protein-containing complex assembly 2.5% (2/80) 3.79 0.009124 0.039539
GO:0004425 indole-3-glycerol-phosphate synthase activity 1.25% (1/80) 6.79 0.008999 0.040494
GO:0043933 protein-containing complex organization 2.5% (2/80) 3.62 0.011456 0.047868
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_8 0.058 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_48 0.051 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_61 0.04 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_141 0.04 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_173 0.045 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_7 0.046 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_253 0.024 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_274 0.07 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_2 0.018 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_54 0.066 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_68 0.036 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_95 0.021 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_96 0.018 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_24 0.018 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_37 0.015 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_74 0.04 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_81 0.017 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_90 0.026 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_9 0.021 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_39 0.036 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_126 0.156 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_5 0.026 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_37 0.023 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_120 0.017 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_213 0.054 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_225 0.089 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_257 0.026 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_4 0.034 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_36 0.059 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_49 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_322 0.043 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_65 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_105 0.043 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_119 0.027 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_155 0.018 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_56 0.016 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_65 0.02 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_102 0.147 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_10 0.05 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_32 0.02 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_75 0.017 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_288 0.033 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_37 0.019 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_23 0.022 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_26 0.02 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_126 0.134 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_28 0.037 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_122 0.127 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_12 0.023 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_22 0.018 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_25 0.089 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_26 0.025 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_60 0.016 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_211 0.167 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_5 0.018 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_8 0.025 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_114 0.074 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_119 0.029 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_185 0.044 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_5 0.04 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_24 0.102 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_53 0.022 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_88 0.126 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_125 0.016 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_18 0.02 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_24 0.023 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_43 0.104 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_48 0.016 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_61 0.02 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_116 0.033 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_148 0.018 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_6 0.039 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_12 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_22 0.038 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_133 0.019 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_34 0.129 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_106 0.032 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_32 0.127 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_66 0.074 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_7 0.025 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_15 0.016 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_163 0.145 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_165 0.017 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_25 0.113 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_36 0.023 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_127 0.03 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_140 0.018 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_39 0.082 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_59 0.067 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_173 0.017 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_124 0.038 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_147 0.019 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_210 0.108 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_5 0.032 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_40 0.044 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_51 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_227 0.026 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_4 0.031 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_10 0.025 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_30 0.021 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_63 0.017 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_64 0.035 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_109 0.091 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_138 0.02 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_28 0.021 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_88 0.018 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_92 0.111 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_11 0.047 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_15 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_20 0.054 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_30 0.031 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_34 0.035 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_37 0.024 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_47 0.018 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_50 0.033 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_54 0.015 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_99 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_112 0.033 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_137 0.019 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_213 0.067 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_7 0.105 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_55 0.023 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_3 0.038 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_9 0.029 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_32 0.018 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_51 0.019 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_8 0.016 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_26 0.086 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_133 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_140 0.028 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_78 0.072 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_58 0.045 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_63 0.016 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_90 0.074 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_170 0.021 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_4 0.076 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_15 0.017 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_26 0.024 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_178 0.015 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_13 0.04 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_44 0.024 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_48 0.019 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_71 0.015 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_79 0.109 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_4 0.053 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_39 0.153 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_114 0.035 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_173 0.016 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_38 0.018 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_81 0.042 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_83 0.235 OrthoFinder output from all 47 species Compare
Sequences (80) (download table)

InterPro Domains

GO Terms

Family Terms