Coexpression cluster: Cluster_37 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0098796 membrane protein complex 25.0% (12/48) 6.27 0.0 0.0
GO:0015979 photosynthesis 16.67% (8/48) 7.84 0.0 0.0
GO:0030076 light-harvesting complex 10.42% (5/48) 8.74 0.0 0.0
GO:0030089 phycobilisome 10.42% (5/48) 8.74 0.0 0.0
GO:0032991 protein-containing complex 25.0% (12/48) 4.28 0.0 0.0
GO:0009521 photosystem 10.42% (5/48) 7.74 0.0 0.0
GO:0009522 photosystem I 6.25% (3/48) 9.01 0.0 0.0
GO:0005575 cellular_component 27.08% (13/48) 2.95 0.0 0.0
GO:0043467 regulation of generation of precursor metabolites and energy 6.25% (3/48) 8.59 0.0 0.0
GO:0042548 regulation of photosynthesis, light reaction 6.25% (3/48) 8.59 0.0 0.0
GO:0010109 regulation of photosynthesis 6.25% (3/48) 8.59 0.0 0.0
GO:0042549 photosystem II stabilization 6.25% (3/48) 8.59 0.0 0.0
GO:0009654 photosystem II oxygen evolving complex 6.25% (3/48) 7.13 1e-06 1e-05
GO:0009987 cellular process 33.33% (16/48) 1.9 2e-06 1.8e-05
GO:1990204 oxidoreductase complex 6.25% (3/48) 6.59 4e-06 2.8e-05
GO:0016491 oxidoreductase activity 14.58% (7/48) 3.43 4e-06 2.9e-05
GO:0008150 biological_process 37.5% (18/48) 1.66 4e-06 3e-05
GO:0010242 oxygen evolving activity 4.17% (2/48) 8.42 1.1e-05 7.3e-05
GO:0010207 photosystem II assembly 4.17% (2/48) 8.01 2.2e-05 0.000139
GO:0009523 photosystem II 4.17% (2/48) 6.84 0.000132 0.000785
GO:0044237 cellular metabolic process 20.83% (10/48) 1.95 0.0002 0.001131
GO:0008152 metabolic process 22.92% (11/48) 1.66 0.000512 0.00277
GO:1902494 catalytic complex 6.25% (3/48) 4.01 0.000867 0.004484
GO:0009055 electron transfer activity 4.17% (2/48) 5.2 0.001353 0.00671
GO:0009538 photosystem I reaction center 2.08% (1/48) 9.01 0.001943 0.008894
GO:0020037 heme binding 4.17% (2/48) 4.96 0.001879 0.008942
GO:0046906 tetrapyrrole binding 4.17% (2/48) 4.84 0.002233 0.009843
GO:0065003 protein-containing complex assembly 4.17% (2/48) 4.8 0.002358 0.010021
GO:0043933 protein-containing complex organization 4.17% (2/48) 4.62 0.003029 0.012431
GO:0022607 cellular component assembly 4.17% (2/48) 4.42 0.00394 0.014207
GO:0009536 plastid 2.08% (1/48) 8.01 0.003883 0.014438
GO:0009507 chloroplast 2.08% (1/48) 8.01 0.003883 0.014438
GO:0019222 regulation of metabolic process 6.25% (3/48) 3.22 0.00413 0.014454
GO:0031323 regulation of cellular metabolic process 6.25% (3/48) 3.26 0.003791 0.015038
GO:0019725 cellular homeostasis 4.17% (2/48) 4.28 0.004783 0.015811
GO:0045454 cell redox homeostasis 4.17% (2/48) 4.28 0.004783 0.015811
GO:0042592 homeostatic process 4.17% (2/48) 4.23 0.005142 0.016537
GO:0110165 cellular anatomical entity 10.42% (5/48) 2.14 0.005302 0.016605
GO:0030258 lipid modification 2.08% (1/48) 7.42 0.005818 0.01731
GO:0030259 lipid glycosylation 2.08% (1/48) 7.42 0.005818 0.01731
GO:0003824 catalytic activity 20.83% (10/48) 1.14 0.013199 0.038308
GO:0006979 response to oxidative stress 2.08% (1/48) 6.2 0.013525 0.03832
GO:0019898 extrinsic component of membrane 2.08% (1/48) 6.01 0.015442 0.042735
GO:0016043 cellular component organization 4.17% (2/48) 3.32 0.017146 0.046371
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_8 0.016 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_173 0.022 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_310 0.018 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_352 0.024 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_126 0.02 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_36 0.016 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_157 0.017 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_217 0.016 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_102 0.029 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_112 0.023 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_441 0.016 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_21 0.016 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_28 0.019 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_27 0.018 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_116 0.022 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_126 0.022 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_15 0.016 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_122 0.034 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_25 0.025 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_211 0.042 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_5 0.019 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_12 0.019 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_96 0.025 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_34 0.016 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_46 0.016 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_32 0.024 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_97 0.015 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_163 0.02 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_25 0.015 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_36 0.02 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_173 0.032 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_5 0.018 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_278 0.018 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_14 0.015 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_87 0.015 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_109 0.017 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_92 0.021 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_34 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_260 0.019 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_7 0.021 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_32 0.02 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_26 0.024 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_146 0.025 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_216 0.021 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_87 0.017 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_2 0.018 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_79 0.024 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_4 0.021 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_39 0.035 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_86 0.016 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_252 0.02 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_54 0.026 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_83 0.041 OrthoFinder output from all 47 species Compare
Sequences (48) (download table)

InterPro Domains

GO Terms

Family Terms