Coexpression cluster: Cluster_88 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009521 photosystem 9.42% (13/138) 6.8 0.0 0.0
GO:0015979 photosynthesis 9.42% (13/138) 6.68 0.0 0.0
GO:0098796 membrane protein complex 10.87% (15/138) 5.19 0.0 0.0
GO:0009523 photosystem II 5.07% (7/138) 7.23 0.0 0.0
GO:0009522 photosystem I 4.35% (6/138) 7.49 0.0 0.0
GO:0009654 photosystem II oxygen evolving complex 4.35% (6/138) 7.35 0.0 0.0
GO:1990204 oxidoreductase complex 4.35% (6/138) 7.23 0.0 0.0
GO:0032991 protein-containing complex 11.59% (16/138) 3.47 0.0 0.0
GO:0005575 cellular_component 19.57% (27/138) 2.24 0.0 0.0
GO:0009538 photosystem I reaction center 2.9% (4/138) 8.23 0.0 0.0
GO:0019898 extrinsic component of membrane 2.9% (4/138) 7.23 0.0 0.0
GO:1902494 catalytic complex 5.07% (7/138) 4.15 0.0 3e-06
GO:0110165 cellular anatomical entity 13.04% (18/138) 1.99 1e-06 1.1e-05
GO:1901566 organonitrogen compound biosynthetic process 5.8% (8/138) 2.68 3.9e-05 0.000573
GO:0005840 ribosome 4.35% (6/138) 3.29 3.8e-05 0.000594
GO:0003735 structural constituent of ribosome 4.35% (6/138) 3.21 5.1e-05 0.000621
GO:0043043 peptide biosynthetic process 4.35% (6/138) 3.21 5.1e-05 0.000621
GO:0006412 translation 4.35% (6/138) 3.23 4.7e-05 0.00064
GO:0043604 amide biosynthetic process 4.35% (6/138) 3.18 5.7e-05 0.000659
GO:0006518 peptide metabolic process 4.35% (6/138) 3.17 6e-05 0.000661
GO:0043603 amide metabolic process 4.35% (6/138) 3.13 6.9e-05 0.000722
GO:0005198 structural molecule activity 4.35% (6/138) 3.09 8.1e-05 0.000808
GO:0044271 cellular nitrogen compound biosynthetic process 5.8% (8/138) 2.51 8.8e-05 0.00084
GO:0043232 intracellular non-membrane-bounded organelle 4.35% (6/138) 3.0 0.000113 0.000986
GO:0043228 non-membrane-bounded organelle 4.35% (6/138) 3.0 0.000113 0.000986
GO:0034645 cellular macromolecule biosynthetic process 4.35% (6/138) 2.83 0.000213 0.001795
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 2.17% (3/138) 4.49 0.000329 0.002575
GO:0016859 cis-trans isomerase activity 2.17% (3/138) 4.49 0.000329 0.002575
GO:0006821 chloride transport 1.45% (2/138) 5.9 0.00049 0.002823
GO:0008509 monoatomic anion transmembrane transporter activity 1.45% (2/138) 5.9 0.00049 0.002823
GO:0015108 chloride transmembrane transporter activity 1.45% (2/138) 5.9 0.00049 0.002823
GO:0005254 chloride channel activity 1.45% (2/138) 5.9 0.00049 0.002823
GO:0005253 monoatomic anion channel activity 1.45% (2/138) 5.9 0.00049 0.002823
GO:0005247 voltage-gated chloride channel activity 1.45% (2/138) 5.9 0.00049 0.002823
GO:0005244 voltage-gated monoatomic ion channel activity 1.45% (2/138) 5.9 0.00049 0.002823
GO:0022832 voltage-gated channel activity 1.45% (2/138) 5.9 0.00049 0.002823
GO:0008308 voltage-gated monoatomic anion channel activity 1.45% (2/138) 5.9 0.00049 0.002823
GO:0044237 cellular metabolic process 15.22% (21/138) 1.15 0.000477 0.003599
GO:0005509 calcium ion binding 2.9% (4/138) 3.21 0.00095 0.005336
GO:0006820 monoatomic anion transport 1.45% (2/138) 5.32 0.001131 0.00619
GO:0009059 macromolecule biosynthetic process 4.35% (6/138) 2.28 0.00156 0.008333
GO:0044249 cellular biosynthetic process 5.8% (8/138) 1.79 0.002375 0.012382
GO:0042549 photosystem II stabilization 0.72% (1/138) 8.23 0.003341 0.013804
GO:0034357 photosynthetic membrane 0.72% (1/138) 8.23 0.003341 0.013804
GO:0010242 oxygen evolving activity 0.72% (1/138) 8.23 0.003341 0.013804
GO:0042651 thylakoid membrane 0.72% (1/138) 8.23 0.003341 0.013804
GO:0009512 cytochrome b6f complex 0.72% (1/138) 8.23 0.003341 0.013804
GO:0043467 regulation of generation of precursor metabolites and energy 0.72% (1/138) 8.23 0.003341 0.013804
GO:0042548 regulation of photosynthesis, light reaction 0.72% (1/138) 8.23 0.003341 0.013804
GO:0010109 regulation of photosynthesis 0.72% (1/138) 8.23 0.003341 0.013804
GO:0022839 monoatomic ion gated channel activity 1.45% (2/138) 4.47 0.003682 0.01466
GO:0022836 gated channel activity 1.45% (2/138) 4.47 0.003682 0.01466
GO:0016020 membrane 5.8% (8/138) 1.74 0.002897 0.014757
GO:0000413 protein peptidyl-prolyl isomerization 1.45% (2/138) 4.42 0.003956 0.014938
GO:0018208 peptidyl-proline modification 1.45% (2/138) 4.42 0.003956 0.014938
GO:1901576 organic substance biosynthetic process 5.8% (8/138) 1.67 0.00383 0.014979
GO:0008152 metabolic process 16.67% (23/138) 0.85 0.004069 0.015103
GO:0043226 organelle 4.35% (6/138) 2.08 0.003148 0.015321
GO:0015103 inorganic anion transmembrane transporter activity 1.45% (2/138) 4.37 0.00424 0.015476
GO:0043229 intracellular organelle 4.35% (6/138) 2.08 0.003112 0.01549
GO:0009055 electron transfer activity 2.17% (3/138) 3.07 0.00562 0.020178
GO:0009987 cellular process 17.39% (24/138) 0.78 0.006146 0.021366
GO:0015698 inorganic anion transport 1.45% (2/138) 4.1 0.006133 0.021663
GO:0009058 biosynthetic process 5.8% (8/138) 1.52 0.007133 0.024408
GO:0016853 isomerase activity 2.17% (3/138) 2.93 0.00736 0.024797
GO:0046146 tetrahydrobiopterin metabolic process 0.72% (1/138) 6.64 0.009989 0.030383
GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity 0.72% (1/138) 6.64 0.009989 0.030383
GO:0034312 diol biosynthetic process 0.72% (1/138) 6.64 0.009989 0.030383
GO:0010207 photosystem II assembly 0.72% (1/138) 6.64 0.009989 0.030383
GO:0034311 diol metabolic process 0.72% (1/138) 6.64 0.009989 0.030383
GO:0070069 cytochrome complex 0.72% (1/138) 6.64 0.009989 0.030383
GO:0006729 tetrahydrobiopterin biosynthetic process 0.72% (1/138) 6.64 0.009989 0.030383
GO:0008080 N-acetyltransferase activity 1.45% (2/138) 3.7 0.010416 0.031248
GO:0016410 N-acyltransferase activity 1.45% (2/138) 3.64 0.011303 0.03257
GO:0051540 metal cluster binding 1.45% (2/138) 3.64 0.011303 0.03257
GO:0051536 iron-sulfur cluster binding 1.45% (2/138) 3.64 0.011303 0.03257
GO:0016407 acetyltransferase activity 1.45% (2/138) 3.55 0.012693 0.035638
GO:0015318 inorganic molecular entity transmembrane transporter activity 2.17% (3/138) 2.64 0.012623 0.035902
GO:0018193 peptidyl-amino acid modification 1.45% (2/138) 3.47 0.014153 0.038745
GO:0005216 monoatomic ion channel activity 1.45% (2/138) 3.47 0.014153 0.038745
GO:0030145 manganese ion binding 0.72% (1/138) 5.9 0.016593 0.044862
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_8 0.061 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_24 0.027 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_48 0.023 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_61 0.025 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_66 0.027 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_141 0.032 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_168 0.021 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_173 0.029 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_2 0.015 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_7 0.059 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_253 0.03 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_260 0.027 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_274 0.079 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_326 0.018 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_2 0.026 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_54 0.043 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_68 0.036 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_96 0.04 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_155 0.017 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_44 0.024 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_74 0.038 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_81 0.022 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_90 0.04 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_9 0.032 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_39 0.066 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_126 0.139 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_37 0.021 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_87 0.029 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_213 0.062 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_225 0.068 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_257 0.034 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_4 0.03 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_36 0.078 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_271 0.024 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_278 0.026 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_305 0.021 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_14 0.029 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_34 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_65 0.02 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_105 0.077 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_101 0.034 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_102 0.124 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_10 0.035 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_288 0.068 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_81 0.02 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_28 0.126 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_54 0.03 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_63 0.029 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_23 0.02 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_103 0.023 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_126 0.147 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_131 0.023 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_15 0.025 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_28 0.031 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_122 0.079 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_12 0.021 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_25 0.114 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_59 0.023 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_60 0.02 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_207 0.025 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_211 0.151 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_37 0.018 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_114 0.085 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_119 0.034 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_185 0.03 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_5 0.042 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_24 0.093 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_24 0.037 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_43 0.113 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_48 0.024 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_116 0.023 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_148 0.024 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_6 0.041 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_22 0.015 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_133 0.024 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_34 0.093 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_106 0.032 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_166 0.042 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_32 0.163 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_42 0.032 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_50 0.033 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_66 0.058 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_7 0.027 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_163 0.098 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_25 0.106 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_36 0.04 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_127 0.04 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_140 0.018 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_11 0.015 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_39 0.099 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_59 0.061 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_100 0.059 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_124 0.042 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_147 0.033 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_210 0.113 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_5 0.081 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_37 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_40 0.059 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_226 0.032 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_227 0.016 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_4 0.039 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_10 0.019 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_30 0.016 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_64 0.04 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_96 0.023 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_99 0.028 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_108 0.016 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_109 0.096 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_92 0.084 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_142 0.024 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_11 0.037 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_20 0.042 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_30 0.039 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_34 0.045 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_37 0.022 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_47 0.018 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_50 0.029 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_62 0.024 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_112 0.02 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_213 0.058 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_222 0.017 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_7 0.095 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_26 0.02 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_43 0.025 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_3 0.043 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_32 0.025 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_51 0.026 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_26 0.07 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_75 0.024 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_133 0.06 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_140 0.03 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_78 0.04 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_41 0.018 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_58 0.047 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_63 0.02 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_90 0.086 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_2 0.051 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_4 0.069 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_26 0.027 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_178 0.016 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_13 0.055 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_79 0.138 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_4 0.046 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_39 0.144 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_114 0.051 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_173 0.016 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_81 0.051 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_83 0.16 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_134 0.029 OrthoFinder output from all 47 species Compare
Sequences (138) (download table)

InterPro Domains

GO Terms

Family Terms