Coexpression cluster: Cluster_46 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016491 oxidoreductase activity 17.24% (10/58) 3.67 0.0 1e-06
GO:0022900 electron transport chain 5.17% (3/58) 8.32 0.0 5e-06
GO:0009055 electron transfer activity 6.9% (4/58) 5.93 1e-06 3.3e-05
GO:0051540 metal cluster binding 6.9% (4/58) 5.15 5e-06 0.000184
GO:0051536 iron-sulfur cluster binding 6.9% (4/58) 5.15 5e-06 0.000184
GO:0006091 generation of precursor metabolites and energy 5.17% (3/58) 5.37 5.3e-05 0.001642
GO:0015986 proton motive force-driven ATP synthesis 3.45% (2/58) 6.73 0.00015 0.002008
GO:0009201 ribonucleoside triphosphate biosynthetic process 3.45% (2/58) 6.73 0.00015 0.002008
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 3.45% (2/58) 6.73 0.00015 0.002008
GO:0009145 purine nucleoside triphosphate biosynthetic process 3.45% (2/58) 6.73 0.00015 0.002008
GO:0009142 nucleoside triphosphate biosynthetic process 3.45% (2/58) 6.73 0.00015 0.002008
GO:0006754 ATP biosynthetic process 3.45% (2/58) 6.73 0.00015 0.002008
GO:0016651 oxidoreductase activity, acting on NAD(P)H 3.45% (2/58) 7.15 8.1e-05 0.002158
GO:0055114 obsolete oxidation-reduction process 10.34% (6/58) 3.02 9.3e-05 0.002183
GO:0009152 purine ribonucleotide biosynthetic process 3.45% (2/58) 6.03 0.000416 0.004572
GO:0046390 ribose phosphate biosynthetic process 3.45% (2/58) 6.03 0.000416 0.004572
GO:0009260 ribonucleotide biosynthetic process 3.45% (2/58) 6.03 0.000416 0.004572
GO:1990204 oxidoreductase complex 3.45% (2/58) 5.73 0.000637 0.006613
GO:0016667 oxidoreductase activity, acting on a sulfur group of donors 3.45% (2/58) 5.65 0.00072 0.00709
GO:0098796 membrane protein complex 5.17% (3/58) 4.0 0.000888 0.0083
GO:0006164 purine nucleotide biosynthetic process 3.45% (2/58) 5.41 0.001002 0.008921
GO:1901135 carbohydrate derivative metabolic process 5.17% (3/58) 3.86 0.00117 0.009945
GO:0072522 purine-containing compound biosynthetic process 3.45% (2/58) 5.21 0.001328 0.010797
GO:0045333 cellular respiration 1.72% (1/58) 7.73 0.004691 0.014867
GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity 1.72% (1/58) 7.73 0.004691 0.014867
GO:1901663 quinone biosynthetic process 1.72% (1/58) 7.73 0.004691 0.014867
GO:1901661 quinone metabolic process 1.72% (1/58) 7.73 0.004691 0.014867
GO:0006081 cellular aldehyde metabolic process 1.72% (1/58) 7.73 0.004691 0.014867
GO:0042181 ketone biosynthetic process 1.72% (1/58) 7.73 0.004691 0.014867
GO:0042180 cellular ketone metabolic process 1.72% (1/58) 7.73 0.004691 0.014867
GO:0070069 cytochrome complex 1.72% (1/58) 7.73 0.004691 0.014867
GO:0006743 ubiquinone metabolic process 1.72% (1/58) 7.73 0.004691 0.014867
GO:0050993 dimethylallyl diphosphate metabolic process 1.72% (1/58) 7.73 0.004691 0.014867
GO:0006744 ubiquinone biosynthetic process 1.72% (1/58) 7.73 0.004691 0.014867
GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor 1.72% (1/58) 7.73 0.004691 0.014867
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 1.72% (1/58) 7.73 0.004691 0.014867
GO:0050992 dimethylallyl diphosphate biosynthetic process 1.72% (1/58) 7.73 0.004691 0.014867
GO:0019682 glyceraldehyde-3-phosphate metabolic process 1.72% (1/58) 7.73 0.004691 0.014867
GO:0009240 isopentenyl diphosphate biosynthetic process 1.72% (1/58) 7.73 0.004691 0.014867
GO:0009060 aerobic respiration 1.72% (1/58) 7.73 0.004691 0.014867
GO:0022904 respiratory electron transport chain 1.72% (1/58) 7.73 0.004691 0.014867
GO:0015980 energy derivation by oxidation of organic compounds 1.72% (1/58) 7.73 0.004691 0.014867
GO:0046490 isopentenyl diphosphate metabolic process 1.72% (1/58) 7.73 0.004691 0.014867
GO:0033743 peptide-methionine (R)-S-oxide reductase activity 1.72% (1/58) 8.73 0.002348 0.01514
GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c 1.72% (1/58) 8.73 0.002348 0.01514
GO:0005750 mitochondrial respiratory chain complex III 1.72% (1/58) 8.73 0.002348 0.01514
GO:0045275 respiratory chain complex III 1.72% (1/58) 8.73 0.002348 0.01514
GO:0019646 aerobic electron transport chain 1.72% (1/58) 8.73 0.002348 0.01514
GO:0070469 respirasome 1.72% (1/58) 8.73 0.002348 0.01514
GO:0009144 purine nucleoside triphosphate metabolic process 3.45% (2/58) 4.65 0.002896 0.01593
GO:0009205 purine ribonucleoside triphosphate metabolic process 3.45% (2/58) 4.65 0.002896 0.01593
GO:0046034 ATP metabolic process 3.45% (2/58) 4.65 0.002896 0.01593
GO:1901137 carbohydrate derivative biosynthetic process 3.45% (2/58) 4.65 0.002896 0.01593
GO:0009199 ribonucleoside triphosphate metabolic process 3.45% (2/58) 4.65 0.002896 0.01593
GO:0009141 nucleoside triphosphate metabolic process 3.45% (2/58) 4.52 0.003423 0.018288
GO:0044237 cellular metabolic process 15.52% (9/58) 1.53 0.00365 0.01896
GO:0006163 purine nucleotide metabolic process 3.45% (2/58) 4.06 0.006417 0.019998
GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor 1.72% (1/58) 7.15 0.007028 0.020534
GO:0051539 4 iron, 4 sulfur cluster binding 1.72% (1/58) 7.15 0.007028 0.020534
GO:0098803 respiratory chain complex 1.72% (1/58) 7.15 0.007028 0.020534
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) 1.72% (1/58) 7.15 0.007028 0.020534
GO:0072521 purine-containing compound metabolic process 3.45% (2/58) 3.98 0.007169 0.020626
GO:0003824 catalytic activity 20.69% (12/58) 1.13 0.007385 0.020923
GO:0044281 small molecule metabolic process 6.9% (4/58) 2.36 0.00761 0.02124
GO:0009150 purine ribonucleotide metabolic process 3.45% (2/58) 4.31 0.004599 0.022053
GO:0009259 ribonucleotide metabolic process 3.45% (2/58) 4.31 0.004599 0.022053
GO:0019693 ribose phosphate metabolic process 3.45% (2/58) 4.31 0.004599 0.022053
GO:0008152 metabolic process 17.24% (10/58) 1.25 0.008183 0.022178
GO:0090407 organophosphate biosynthetic process 5.17% (3/58) 2.87 0.008107 0.022294
GO:0004602 glutathione peroxidase activity 1.72% (1/58) 6.73 0.009359 0.023652
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 1.72% (1/58) 6.73 0.009359 0.023652
GO:0016725 oxidoreductase activity, acting on CH or CH2 groups 1.72% (1/58) 6.73 0.009359 0.023652
GO:0015252 proton channel activity 1.72% (1/58) 6.73 0.009359 0.023652
GO:0030163 protein catabolic process 1.72% (1/58) 6.73 0.009359 0.023652
GO:0003955 NAD(P)H dehydrogenase (quinone) activity 1.72% (1/58) 6.41 0.011686 0.027316
GO:0008137 NADH dehydrogenase (ubiquinone) activity 1.72% (1/58) 6.41 0.011686 0.027316
GO:0098800 inner mitochondrial membrane protein complex 1.72% (1/58) 6.41 0.011686 0.027316
GO:0003954 NADH dehydrogenase activity 1.72% (1/58) 6.41 0.011686 0.027316
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 1.72% (1/58) 6.41 0.011686 0.027316
GO:0050136 NADH dehydrogenase (quinone) activity 1.72% (1/58) 6.41 0.011686 0.027316
GO:0005743 mitochondrial inner membrane 1.72% (1/58) 6.15 0.014007 0.031182
GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain 1.72% (1/58) 6.15 0.014007 0.031182
GO:0098798 mitochondrial protein-containing complex 1.72% (1/58) 6.15 0.014007 0.031182
GO:0019866 organelle inner membrane 1.72% (1/58) 6.15 0.014007 0.031182
GO:0019637 organophosphate metabolic process 5.17% (3/58) 2.56 0.014297 0.031453
GO:0006801 superoxide metabolic process 1.72% (1/58) 5.93 0.016323 0.034685
GO:0072593 reactive oxygen species metabolic process 1.72% (1/58) 5.93 0.016323 0.034685
GO:0006979 response to oxidative stress 1.72% (1/58) 5.93 0.016323 0.034685
GO:0019898 extrinsic component of membrane 1.72% (1/58) 5.73 0.018633 0.038715
GO:0015453 oxidoreduction-driven active transmembrane transporter activity 1.72% (1/58) 5.73 0.018633 0.038715
GO:0005261 monoatomic cation channel activity 1.72% (1/58) 5.56 0.020938 0.041653
GO:1990351 transporter complex 1.72% (1/58) 5.56 0.020938 0.041653
GO:0009523 photosystem II 1.72% (1/58) 5.56 0.020938 0.041653
GO:1902495 transmembrane transporter complex 1.72% (1/58) 5.56 0.020938 0.041653
GO:1901576 organic substance biosynthetic process 6.9% (4/58) 1.91 0.021598 0.042072
GO:1902494 catalytic complex 3.45% (2/58) 3.15 0.021455 0.042233
GO:0050662 obsolete coenzyme binding 1.72% (1/58) 5.41 0.023238 0.044341
GO:1901565 organonitrogen compound catabolic process 1.72% (1/58) 5.41 0.023238 0.044341
GO:0003674 molecular_function 32.76% (19/58) 0.65 0.0235 0.044388
GO:0009654 photosystem II oxygen evolving complex 1.72% (1/58) 5.27 0.025532 0.046354
GO:0015035 protein-disulfide reductase activity 1.72% (1/58) 5.27 0.025532 0.046354
GO:0015036 disulfide oxidoreductase activity 1.72% (1/58) 5.27 0.025532 0.046354
GO:0031966 mitochondrial membrane 1.72% (1/58) 5.27 0.025532 0.046354
GO:0009521 photosystem 1.72% (1/58) 5.15 0.027821 0.04908
GO:0004601 peroxidase activity 1.72% (1/58) 5.15 0.027821 0.04908
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor 1.72% (1/58) 5.15 0.027821 0.04908
GO:0009058 biosynthetic process 6.9% (4/58) 1.79 0.028528 0.049857
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Actinostachys digitata HCCA Cluster_7 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_54 0.018 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_177 0.032 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_96 0.019 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_5 0.022 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_102 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_107 0.017 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_118 0.017 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_127 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_163 0.018 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_192 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_209 0.019 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_213 0.017 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_222 0.02 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_254 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_36 0.02 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_51 0.015 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_173 0.015 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_300 0.033 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_128 0.019 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_21 0.019 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_37 0.017 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_8 0.02 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_43 0.017 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_55 0.016 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_56 0.019 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_81 0.016 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_1 0.018 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_10 0.016 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_22 0.045 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_26 0.031 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_10 0.033 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_52 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_126 0.015 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_133 0.02 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_150 0.02 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_15 0.024 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_4 0.04 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_12 0.025 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_185 0.016 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_15 0.017 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_24 0.02 OrthoFinder output from all 47 species Compare
Gingko biloba HCCA Cluster_31 0.016 OrthoFinder output from all 47 species Compare
Gingko biloba HCCA Cluster_105 0.02 OrthoFinder output from all 47 species Compare
Gingko biloba HCCA Cluster_261 0.016 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_43 0.028 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_48 0.016 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_132 0.021 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_148 0.041 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_5 0.018 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_22 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_124 0.019 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_130 0.03 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_133 0.031 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_1 0.02 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_106 0.016 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_25 0.111 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_73 0.054 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_12 0.02 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_165 0.018 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_25 0.021 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_45 0.03 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_65 0.016 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_111 0.037 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_147 0.08 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_175 0.026 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_202 0.019 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_206 0.02 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_53 0.02 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_87 0.021 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_226 0.019 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_275 0.017 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_10 0.015 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_30 0.017 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_99 0.018 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_73 0.018 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_118 0.021 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_374 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_50 0.023 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_166 0.028 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_188 0.018 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_213 0.031 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_222 0.018 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_56 0.017 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_57 0.021 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_161 0.016 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_178 0.045 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_9 0.015 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_35 0.031 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_24 0.02 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_96 0.021 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_121 0.021 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_128 0.02 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_8 0.021 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_38 0.028 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_76 0.015 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_43 0.029 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_57 0.024 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_90 0.016 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_118 0.016 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_32 0.022 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_140 0.019 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_169 0.02 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_80 0.051 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_213 0.016 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_268 0.016 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_129 0.019 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_157 0.022 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_169 0.066 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_5 0.06 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_83 0.027 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_116 0.049 OrthoFinder output from all 47 species Compare
Sequences (58) (download table)

InterPro Domains

GO Terms

Family Terms