Coexpression cluster: Cluster_102 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 57.45% (54/94) 1.3 0.0 0.0
GO:0005488 binding 35.11% (33/94) 1.37 0.0 1.7e-05
GO:1901363 heterocyclic compound binding 23.4% (22/94) 1.53 5e-06 0.000335
GO:0097159 organic cyclic compound binding 23.4% (22/94) 1.53 5e-06 0.000335
GO:0008150 biological_process 29.79% (28/94) 1.25 8e-06 0.000452
GO:0005524 ATP binding 11.7% (11/94) 1.96 0.000121 0.005771
GO:0019222 regulation of metabolic process 7.45% (7/94) 2.52 0.000236 0.006147
GO:0030554 adenyl nucleotide binding 11.7% (11/94) 1.82 0.000283 0.006231
GO:0003676 nucleic acid binding 11.7% (11/94) 1.83 0.00027 0.006434
GO:0060255 regulation of macromolecule metabolic process 7.45% (7/94) 2.52 0.000233 0.006664
GO:0051171 regulation of nitrogen compound metabolic process 7.45% (7/94) 2.54 0.000212 0.006733
GO:0080090 regulation of primary metabolic process 7.45% (7/94) 2.54 0.000212 0.006733
GO:0032559 adenyl ribonucleotide binding 11.7% (11/94) 1.91 0.000165 0.006743
GO:0043167 ion binding 17.02% (16/94) 1.38 0.000368 0.007528
GO:0043168 anion binding 12.77% (12/94) 1.57 0.000695 0.013256
GO:0036094 small molecule binding 12.77% (12/94) 1.5 0.00107 0.016105
GO:0035639 purine ribonucleoside triphosphate binding 11.7% (11/94) 1.61 0.000971 0.016328
GO:0009987 cellular process 19.15% (18/94) 1.14 0.001148 0.016412
GO:0065007 biological regulation 7.45% (7/94) 2.16 0.001038 0.016486
GO:0032555 purine ribonucleotide binding 11.7% (11/94) 1.57 0.001215 0.016546
GO:0032553 ribonucleotide binding 11.7% (11/94) 1.54 0.00141 0.016806
GO:0097367 carbohydrate derivative binding 11.7% (11/94) 1.53 0.001485 0.016993
GO:0050789 regulation of biological process 7.45% (7/94) 2.18 0.000952 0.017009
GO:0003723 RNA binding 6.38% (6/94) 2.31 0.001401 0.017424
GO:0031323 regulation of cellular metabolic process 6.38% (6/94) 2.32 0.001342 0.01745
GO:0017076 purine nucleotide binding 11.7% (11/94) 1.49 0.001857 0.020429
GO:0001181 RNA polymerase I general transcription initiation factor activity 1.06% (1/94) 8.42 0.002924 0.023891
GO:0006361 transcription initiation at RNA polymerase I promoter 1.06% (1/94) 8.42 0.002924 0.023891
GO:0140223 general transcription initiation factor activity 1.06% (1/94) 8.42 0.002924 0.023891
GO:0000502 proteasome complex 1.06% (1/94) 8.42 0.002924 0.023891
GO:0042176 regulation of protein catabolic process 1.06% (1/94) 8.42 0.002924 0.023891
GO:0009894 regulation of catabolic process 1.06% (1/94) 8.42 0.002924 0.023891
GO:0000166 nucleotide binding 11.7% (11/94) 1.43 0.002594 0.026495
GO:1901265 nucleoside phosphate binding 11.7% (11/94) 1.43 0.002594 0.026495
GO:0003824 catalytic activity 20.21% (19/94) 0.99 0.002694 0.026572
GO:0055085 transmembrane transport 5.32% (5/94) 2.3 0.003632 0.028856
GO:0061617 MICOS complex 1.06% (1/94) 7.83 0.004382 0.029842
GO:0004556 alpha-amylase activity 1.06% (1/94) 7.83 0.004382 0.029842
GO:0008535 respiratory chain complex IV assembly 1.06% (1/94) 7.83 0.004382 0.029842
GO:0033617 mitochondrial cytochrome c oxidase assembly 1.06% (1/94) 7.83 0.004382 0.029842
GO:0051252 regulation of RNA metabolic process 5.32% (5/94) 2.2 0.004889 0.030397
GO:0006355 regulation of DNA-templated transcription 5.32% (5/94) 2.2 0.004835 0.030727
GO:2001141 regulation of RNA biosynthetic process 5.32% (5/94) 2.2 0.004835 0.030727
GO:1903506 regulation of nucleic acid-templated transcription 5.32% (5/94) 2.2 0.004835 0.030727
GO:0051246 regulation of protein metabolic process 2.13% (2/94) 4.39 0.004148 0.031217
GO:0019219 regulation of nucleobase-containing compound metabolic process 5.32% (5/94) 2.18 0.005168 0.031445
GO:0050794 regulation of cellular process 6.38% (6/94) 1.99 0.004123 0.03187
GO:0031326 regulation of cellular biosynthetic process 5.32% (5/94) 2.13 0.005913 0.032521
GO:0010556 regulation of macromolecule biosynthetic process 5.32% (5/94) 2.13 0.005913 0.032521
GO:0009889 regulation of biosynthetic process 5.32% (5/94) 2.13 0.005913 0.032521
GO:0016301 kinase activity 6.38% (6/94) 1.88 0.006046 0.032627
GO:0016773 phosphotransferase activity, alcohol group as acceptor 6.38% (6/94) 1.9 0.005647 0.033645
GO:0010468 regulation of gene expression 5.32% (5/94) 2.1 0.006395 0.033869
GO:0004594 pantothenate kinase activity 1.06% (1/94) 7.42 0.005839 0.03408
GO:0017004 cytochrome complex assembly 1.06% (1/94) 7.1 0.007293 0.037248
GO:1905369 endopeptidase complex 1.06% (1/94) 7.1 0.007293 0.037248
GO:0034033 purine nucleoside bisphosphate biosynthetic process 1.06% (1/94) 6.83 0.008746 0.038481
GO:0010167 response to nitrate 1.06% (1/94) 6.83 0.008746 0.038481
GO:0015706 nitrate transmembrane transport 1.06% (1/94) 6.83 0.008746 0.038481
GO:0015937 coenzyme A biosynthetic process 1.06% (1/94) 6.83 0.008746 0.038481
GO:0098661 inorganic anion transmembrane transport 1.06% (1/94) 6.83 0.008746 0.038481
GO:1901698 response to nitrogen compound 1.06% (1/94) 6.83 0.008746 0.038481
GO:1902025 nitrate import 1.06% (1/94) 6.83 0.008746 0.038481
GO:0033866 nucleoside bisphosphate biosynthetic process 1.06% (1/94) 6.83 0.008746 0.038481
GO:0034030 ribonucleoside bisphosphate biosynthetic process 1.06% (1/94) 6.83 0.008746 0.038481
GO:0016998 cell wall macromolecule catabolic process 1.06% (1/94) 6.61 0.010196 0.042261
GO:0044036 cell wall macromolecule metabolic process 1.06% (1/94) 6.61 0.010196 0.042261
GO:0004568 chitinase activity 1.06% (1/94) 6.61 0.010196 0.042261
GO:0033108 mitochondrial respiratory chain complex assembly 1.06% (1/94) 6.61 0.010196 0.042261
GO:0046348 amino sugar catabolic process 1.06% (1/94) 6.42 0.011644 0.043819
GO:1901072 glucosamine-containing compound catabolic process 1.06% (1/94) 6.42 0.011644 0.043819
GO:0019212 phosphatase inhibitor activity 1.06% (1/94) 6.42 0.011644 0.043819
GO:0006032 chitin catabolic process 1.06% (1/94) 6.42 0.011644 0.043819
GO:0004864 protein phosphatase inhibitor activity 1.06% (1/94) 6.42 0.011644 0.043819
GO:0006026 aminoglycan catabolic process 1.06% (1/94) 6.42 0.011644 0.043819
GO:0016772 transferase activity, transferring phosphorus-containing groups 6.38% (6/94) 1.68 0.011372 0.046463
GO:0098660 inorganic ion transmembrane transport 2.13% (2/94) 3.51 0.013516 0.047142
GO:0006793 phosphorus metabolic process 6.38% (6/94) 1.63 0.013383 0.047255
GO:0006796 phosphate-containing compound metabolic process 6.38% (6/94) 1.63 0.013383 0.047255
GO:1901071 glucosamine-containing compound metabolic process 1.06% (1/94) 6.25 0.01309 0.04739
GO:0006030 chitin metabolic process 1.06% (1/94) 6.25 0.01309 0.04739
GO:0006040 amino sugar metabolic process 1.06% (1/94) 6.25 0.01309 0.04739
GO:1901700 response to oxygen-containing compound 1.06% (1/94) 6.1 0.014534 0.049485
GO:0006022 aminoglycan metabolic process 1.06% (1/94) 6.1 0.014534 0.049485
GO:0010035 response to inorganic substance 1.06% (1/94) 5.83 0.017416 0.049809
GO:0051336 regulation of hydrolase activity 1.06% (1/94) 5.83 0.017416 0.049809
GO:0035303 regulation of dephosphorylation 1.06% (1/94) 5.83 0.017416 0.049809
GO:0010646 regulation of cell communication 1.06% (1/94) 5.83 0.017416 0.049809
GO:0009966 regulation of signal transduction 1.06% (1/94) 5.83 0.017416 0.049809
GO:0023051 regulation of signaling 1.06% (1/94) 5.83 0.017416 0.049809
GO:0043666 regulation of phosphoprotein phosphatase activity 1.06% (1/94) 5.83 0.017416 0.049809
GO:0010921 regulation of phosphatase activity 1.06% (1/94) 5.83 0.017416 0.049809
GO:0035304 regulation of protein dephosphorylation 1.06% (1/94) 5.83 0.017416 0.049809
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Actinostachys digitata HCCA Cluster_177 0.022 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_190 0.036 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_193 0.029 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_311 0.053 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_131 0.023 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_90 0.018 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_80 0.033 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_126 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_69 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_72 0.037 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_73 0.022 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_92 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_139 0.042 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_157 0.019 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_232 0.017 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_6 0.017 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_128 0.021 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_150 0.048 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_173 0.077 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_193 0.037 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_224 0.021 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_252 0.032 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_78 0.021 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_36 0.024 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_112 0.023 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_119 0.048 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_257 0.024 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_46 0.016 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_1 0.017 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_100 0.08 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_125 0.018 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_8 0.017 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_92 0.02 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_44 0.031 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_78 0.021 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_124 0.026 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_10 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_24 0.018 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_122 0.024 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_123 0.019 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_58 0.017 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_233 0.062 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_289 0.021 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_72 0.022 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_45 0.02 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_29 0.015 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_125 0.03 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_144 0.037 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_3 0.02 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_30 0.028 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_91 0.033 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_167 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_197 0.018 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_209 0.018 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_260 0.015 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_262 0.017 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_22 0.025 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_31 0.015 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_39 0.042 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_128 0.021 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_85 0.015 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_104 0.017 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_140 0.022 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_152 0.037 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_156 0.019 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_70 0.038 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_124 0.017 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_169 0.021 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_46 0.021 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_132 0.02 OrthoFinder output from all 47 species Compare
Sequences (94) (download table)

InterPro Domains

GO Terms

Family Terms