Cba_g34398


Description : not classified & original description: none


Gene families : OG0000791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000791_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g34398

Target Alias Description ECC score Gene Family Method Actions
AT1G80720 No alias Mitochondrial glycoprotein family protein 0.02 OrthoFinder output from all 47 species
Adi_g023715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15202 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g10589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g38997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55427.t1 Aspi01Gene55427 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0185.g056596 No alias not classified & original description: CDS=77-799 0.03 OrthoFinder output from all 47 species
Ceric.06G023100.1 Ceric.06G023100 not classified & original description: pacid=50619513... 0.05 OrthoFinder output from all 47 species
Ceric.10G002400.1 Ceric.10G002400 not classified & original description: pacid=50611676... 0.06 OrthoFinder output from all 47 species
Cre04.g225600 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre10.g447100 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g03591 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g41118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_41394 No alias Uncharacterized protein At2g39795, mitochondrial... 0.04 OrthoFinder output from all 47 species
LOC_Os06g22070.1 LOC_Os06g22070 Uncharacterized protein At2g39795, mitochondrial... 0.02 OrthoFinder output from all 47 species
Len_g04606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_123491g0010 No alias Uncharacterized protein At2g39795, mitochondrial... 0.02 OrthoFinder output from all 47 species
Ore_g03427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023123 No alias not classified & original description: CDS=1-750 0.02 OrthoFinder output from all 47 species
Sam_g11538 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17949 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g01691 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g09185 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e025796_P002 Zm00001e025796 Uncharacterized protein At2g39795, mitochondrial... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0110154 RNA decapping IEP HCCA
BP GO:0110156 methylguanosine-cap decapping IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003428 MAM33 68 269
No external refs found!