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  5. Cba_g20752

Cba_g20752


Description : not classified & original description: none


Gene families : OG0005435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005435_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20752

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00231930 evm_27.TU.AmTr_v1... Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT4G36530 No alias alpha/beta-Hydrolases superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g018083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43543 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g10820 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g54023 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12149 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene04082.t1 Aspi01Gene04082 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0008.g011515 No alias not classified & original description: CDS=131-1312 0.02 OrthoFinder output from all 47 species
Ceric.20G060200.1 Ceric.20G060200 not classified & original description: pacid=50566415... 0.03 OrthoFinder output from all 47 species
Cre10.g456150 No alias Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g05022 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g09953 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g11050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018934001 No alias Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_04951 No alias Pheophytinase, chloroplastic OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
LOC_Os02g47620.1 LOC_Os02g47620 Pheophytinase, chloroplastic OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g04690 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Lfl_g18117 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_196209g0010 No alias Pheophytinase, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp1g03260.1 No alias Pheophytinase, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g28817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11152 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g00635 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g65212 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g23732 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g17144 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo160384 No alias Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
Solyc02g062610.3.1 Solyc02g062610 Pheophytinase, chloroplastic OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Spa_g21863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023325_P002 Zm00001e023325 Pheophytinase, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 110 366
No external refs found!