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  5. Cba_g16980

Cba_g16980


Description : autophagosome cargo receptor protein *(NBR1) & original description: none


Gene families : OG0000431 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g16980

Target Alias Description ECC score Gene Family Method Actions
AT4G24690 No alias ubiquitin-associated (UBA)/TS-N domain-containing... 0.03 OrthoFinder output from all 47 species
Adi_g040172 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Adi_g113227 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Ala_g06724 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Als_g07387 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Als_g45818 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Aop_g13825 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene46310.t1 Aspi01Gene46310 autophagosome cargo receptor protein *(NBR1) & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021275.7 No alias Vesicle trafficking.autophagosome formation.cargo... 0.01 OrthoFinder output from all 47 species
Dac_g11288 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Dac_g13390 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Dac_g14984 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Dac_g15445 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g08201 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g09791 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g14085 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g09575 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g10374 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Msp_g26552 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.04 OrthoFinder output from all 47 species
Ore_g37619 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Pir_g08026 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Pir_g20044 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g04066 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g17555 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g31492 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003006 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Sam_g07048 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Sam_g07049 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Sam_g29268 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Spa_g50116 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Spa_g56263 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Tin_g11535 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019781 NEDD8 activating enzyme activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019786 Atg8-specific peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045116 protein neddylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000433 Znf_ZZ 216 258
IPR032350 N_BRCA1_central 337 438
IPR000270 PB1_dom 5 73
No external refs found!