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  5. Cba_g13333

Cba_g13333 (FTSH8)


Aliases : FTSH8

Description : component *(FtsH1/2/5/6/8) of FtsH plastidial protease complexes & original description: none


Gene families : OG0001722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001722_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g13333
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00262430 ATFTSH6, FTSH6,... ATP-dependent zinc metalloprotease FTSH 6, chloroplastic... 0.01 OrthoFinder output from all 47 species
AMTR_s00106p00108310 VAR2, FTSH2,... Protein degradation.peptidase families.metallopeptidase... 0.07 OrthoFinder output from all 47 species
AT1G06430 FTSH8 FTSH protease 8 0.02 OrthoFinder output from all 47 species
AT3G02450 No alias cell division protein ftsH, putative 0.05 OrthoFinder output from all 47 species
Adi_g087056 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.11 OrthoFinder output from all 47 species
Adi_g087057 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.06 OrthoFinder output from all 47 species
Adi_g114970 VAR2, FTSH2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g02360 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Ala_g14174 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.05 OrthoFinder output from all 47 species
Als_g07586 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
Als_g20560 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Aob_g10132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17362 VAR2, FTSH2 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.09 OrthoFinder output from all 47 species
Aop_g14163 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.06 OrthoFinder output from all 47 species
Aspi01Gene12384.t1 FTSH8, Aspi01Gene12384 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Azfi_s0022.g016135 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Ceric.03G093200.1 FTSH8, Ceric.03G093200 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Ceric.22G054100.1 FTSH8, Ceric.22G054100 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021179.74 ATFTSH6, FTSH6 ATP-dependent zinc metalloprotease FTSH 1, chloroplastic... 0.01 OrthoFinder output from all 47 species
Cre09.g393950 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.02 OrthoFinder output from all 47 species
Cre17.g720050 FTSH8 Protein degradation.peptidase families.metallopeptidase... 0.04 OrthoFinder output from all 47 species
Dac_g10534 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.05 OrthoFinder output from all 47 species
Dcu_g12670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g13134 VAR2, FTSH2 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.06 OrthoFinder output from all 47 species
Dcu_g44210 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Dde_g07705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23743 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.06 OrthoFinder output from all 47 species
Ehy_g03938 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
GSVIVT01020760001 VAR2, FTSH2 Protein degradation.peptidase families.metallopeptidase... 0.03 OrthoFinder output from all 47 species
GSVIVT01036484001 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.04 OrthoFinder output from all 47 species
Gb_12830 FTSH8 component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.04 OrthoFinder output from all 47 species
Gb_32360 No alias component FtsHi of protein translocation ATPase motor complex 0.03 OrthoFinder output from all 47 species
LOC_Os06g45820.1 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.05 OrthoFinder output from all 47 species
Len_g21745 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.05 OrthoFinder output from all 47 species
Len_g44862 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Lfl_g04989 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
Mp4g19200.1 VAR2, FTSH2 component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.04 OrthoFinder output from all 47 species
Msp_g02086 VAR2, FTSH2 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
Msp_g07153 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g11426 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Ore_g26838 VAR2, FTSH2 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
Ore_g45571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09681 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.05 OrthoFinder output from all 47 species
Pnu_g12324 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17712 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008575 FTSH8 not classified & original description: CDS=1-1161 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0187.g025114 No alias not classified & original description: CDS=1-1989 0.02 OrthoFinder output from all 47 species
Sam_g18762 No alias component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.05 OrthoFinder output from all 47 species
Sam_g37450 No alias component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.06 OrthoFinder output from all 47 species
Smo149856 VAR2, FTSH2 Protein degradation.peptidase families.metallopeptidase... 0.03 OrthoFinder output from all 47 species
Smo152929 FTSH8 Protein degradation.peptidase families.metallopeptidase... 0.04 OrthoFinder output from all 47 species
Solyc03g046340.3.1 Solyc03g046340 component FtsHi of protein translocation ATPase motor complex 0.02 OrthoFinder output from all 47 species
Solyc07g055320.4.1 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.03 OrthoFinder output from all 47 species
Spa_g25819 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.09 OrthoFinder output from all 47 species
Tin_g04117 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
Zm00001e007868_P001 Zm00001e007868 component FtsHi of protein translocation ATPase motor complex 0.03 OrthoFinder output from all 47 species
Zm00001e030358_P003 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.03 OrthoFinder output from all 47 species
Zm00001e037753_P001 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000642 Peptidase_M41 484 673
IPR041569 AAA_lid_3 425 468
IPR003959 ATPase_AAA_core 270 401
No external refs found!