Cba_g09287


Description : not classified & original description: none


Gene families : OG0007249 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007249_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g09287

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00149060 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G62140 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.05 OrthoFinder output from all 47 species
Adi_g014998 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g03657 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g08737 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g19336 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.12G021000.1 Ceric.12G021000 not classified & original description: pacid=50600776... 0.03 OrthoFinder output from all 47 species
Dac_g06848 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01010637001 No alias No description available 0.06 OrthoFinder output from all 47 species
LOC_Os02g45460.1 LOC_Os02g45460 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g28021 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp6g17680.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g45131 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g00435 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g13296 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g12649 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g07177 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g37163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g026330.4.1 Solyc03g026330 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g06342 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g06429 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!