Description : not classified & original description: none
Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00078p00168800 | evm_27.TU.AmTr_v1... | Zinc finger A20 and AN1 domain-containing... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g009351 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g05814 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0064.g035696 | No alias | not classified & original description: CDS=1-846 | 0.02 | OrthoFinder output from all 47 species | |
Ceric.1Z114000.1 | Ceric.1Z114000 | not classified & original description: pacid=50569308... | 0.02 | OrthoFinder output from all 47 species | |
Dde_g03107 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g25513 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01033341001 | No alias | Zinc finger A20 and AN1 domain-containing... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g57890.1 | LOC_Os03g57890 | Zinc finger A20 and AN1 domain-containing... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os08g39450.1 | LOC_Os08g39450 | Zinc finger A20 and AN1 domain-containing... | 0.02 | OrthoFinder output from all 47 species | |
Len_g17465 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g00472 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g06968 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g20395 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g26752 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g02780 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g13125 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g32075 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g34638 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g07147 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
BP | GO:0000966 | RNA 5'-end processing | IEP | HCCA |
BP | GO:0001682 | tRNA 5'-leader removal | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003729 | mRNA binding | IEP | HCCA |
CC | GO:0005849 | mRNA cleavage factor complex | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006378 | mRNA polyadenylation | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
MF | GO:0008962 | phosphatidylglycerophosphatase activity | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
MF | GO:0016791 | phosphatase activity | IEP | HCCA |
CC | GO:0030677 | ribonuclease P complex | IEP | HCCA |
BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043631 | RNA polyadenylation | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0099116 | tRNA 5'-end processing | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
CC | GO:1902555 | endoribonuclease complex | IEP | HCCA |
CC | GO:1905348 | endonuclease complex | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |