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  5. Cba_g02053

Cba_g02053 (GCN3, ATGCN3)


Aliases : GCN3, ATGCN3

Description : regulatory protein *(GCN20) of eIF2-alpha kinase activity & original description: none


Gene families : OG0006468 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006468_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g02053
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
Adi_g117573 GCN3, ATGCN3 regulatory protein *(GCN20) of eIF2-alpha kinase... 0.02 OrthoFinder output from all 47 species
Ala_g02506 GCN3, ATGCN3 regulatory protein *(GCN20) of eIF2-alpha kinase... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020629.98 GCN3, ATGCN3 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre11.g478128 GCN3, ATGCN3 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g01906 GCN3, ATGCN3 regulatory protein *(GCN20) of eIF2-alpha kinase... 0.03 OrthoFinder output from all 47 species
GSVIVT01019609001 GCN3, ATGCN3 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Mp7g18200.1 GCN3, ATGCN3 ABC transporter F family member 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Tin_g02806 GCN3, ATGCN3 regulatory protein *(GCN20) of eIF2-alpha kinase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032781 ABC_tran_Xtn 449 530
IPR003439 ABC_transporter-like_ATP-bd 563 693
IPR003439 ABC_transporter-like_ATP-bd 204 410
No external refs found!