Sam_g47835


Description : not classified & original description: none


Gene families : OG0001691 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001691_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g47835

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00062850 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Ceric.28G031500.1 Ceric.28G031500 not classified & original description: pacid=50570282... 0.04 OrthoFinder output from all 47 species
Dac_g22011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os09g29950.3 LOC_Os09g29950 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10429264g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g07873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g090180.3.1 Solyc02g090180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR023302 Pept_S9A_N 1 87
No external refs found!