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  5. Sam_g28849

Sam_g28849


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28849
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT1G45191 BGLU1 Glycosyl hydrolase superfamily protein 0.04 OrthoFinder output from all 47 species
Gb_35945 BGLU15 Beta-glucosidase 12 OS=Oryza sativa subsp. indica... 0.02 OrthoFinder output from all 47 species
MA_940685g0010 BGLU17 Beta-glucosidase 13 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e034671_P001 BGLU11, Zm00001e034671 Beta-glucosidase 31 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e041225_P001 BGLU46, Zm00001e041225 coniferin beta-glucosidase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001360 Glyco_hydro_1 31 501
No external refs found!