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  5. Sam_g24203

Sam_g24203


Description : scaffold protein of amylose biosynthesis *(PTST1) & original description: none


Gene families : OG0005315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g24203

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01030813001 No alias Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Msp_g19372 No alias scaffold protein of amylose biosynthesis *(PTST1) &... 0.03 OrthoFinder output from all 47 species
Pir_g62002 No alias scaffold protein of amylose biosynthesis *(PTST1) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007317 No alias scaffold protein of amylose biosynthesis *(PTST1) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR032640 AMPK1_CBM 216 264
No external refs found!