1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g19405

Sam_g19405


Description : plastidial protease *(SppA) & original description: none


Gene families : OG0003669 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003669_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19405

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00260630 SPPA1, SPPA,... Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder output from all 47 species
Aev_g10536 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g08975 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene63154.t1 SPPA1, SPPA,... plastidial protease *(SppA) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0230.g059188 SPPA1, SPPA plastidial protease *(SppA) & original description: CDS=185-2362 0.03 OrthoFinder output from all 47 species
Cba_g01199 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.37G010400.1 SPPA1, SPPA,... plastidial protease *(SppA) & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000663.54 SPPA1, SPPA Protein degradation.peptidase families.serine-type... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021276.11 SPPA1, SPPA Serine protease SPPA, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre10.g444550 SPPA1, SPPA Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Dcu_g07614 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10356 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.07 OrthoFinder output from all 47 species
Gb_05224 SPPA1, SPPA plastidial protease (SppA) 0.05 OrthoFinder output from all 47 species
LOC_Os02g49570.1 SPPA1, SPPA,... plastidial protease (SppA) 0.02 OrthoFinder output from all 47 species
Len_g23586 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10431775g0010 SPPA1, SPPA Serine protease SPPA, chloroplastic OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_179977g0010 SPPA1, SPPA Serine protease SPPA, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g26653 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03780 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06891 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g10891 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g31090 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0977.g027894 SPPA1, SPPA plastidial protease *(SppA) & original description: CDS=2-775 0.02 OrthoFinder output from all 47 species
Smo173134 SPPA1, SPPA Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Spa_g12494 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g11091 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e023452_P001 SPPA1, SPPA,... plastidial protease (SppA) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008233 peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002142 Peptidase_S49 251 402
IPR002142 Peptidase_S49 501 651
No external refs found!