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  5. Sam_g17684

Sam_g17684


Description : co-chaperone *(Hsp40) & original description: none


Gene families : OG0000947 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000947_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17684
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00203200 evm_27.TU.AmTr_v1... Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species
AT1G80030 No alias Molecular chaperone Hsp40/DnaJ family protein 0.03 OrthoFinder output from all 47 species
AT2G22360 No alias DNAJ heat shock family protein 0.02 OrthoFinder output from all 47 species
AT3G17830 No alias Molecular chaperone Hsp40/DnaJ family protein 0.02 OrthoFinder output from all 47 species
AT4G39960 No alias Molecular chaperone Hsp40/DnaJ family protein 0.05 OrthoFinder output from all 47 species
Adi_g054489 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058767 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g079838 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28745 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06509 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26939 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00694 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03171 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32177.t1 Aspi01Gene32177 co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43769.t1 Aspi01Gene43769 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010391 No alias co-chaperone *(Hsp40) & original description: CDS=261-1553 0.03 OrthoFinder output from all 47 species
Cba_g12870 No alias co-chaperone *(Hsp40) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g25560 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.04G098500.1 Ceric.04G098500 co-chaperone *(Hsp40) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.05G065700.1 Ceric.05G065700 co-chaperone *(Hsp40) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.20G039800.1 Ceric.20G039800 co-chaperone *(Hsp40) & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021350.15 No alias Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.01 OrthoFinder output from all 47 species
Cre12.g507650 No alias Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.01 OrthoFinder output from all 47 species
Dac_g14376 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09427 No alias co-chaperone *(Hsp40) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g10357 No alias co-chaperone *(Hsp40) & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g02188 No alias co-chaperone *(Hsp40) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g11405 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13242 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13529 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017355001 No alias Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.05 OrthoFinder output from all 47 species
Gb_03413 No alias co-chaperone (Hsp40) 0.05 OrthoFinder output from all 47 species
LOC_Os02g56040.1 LOC_Os02g56040 co-chaperone (Hsp40) 0.06 OrthoFinder output from all 47 species
LOC_Os05g26902.1 LOC_Os05g26902 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species
LOC_Os05g26926.1 LOC_Os05g26926 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species
Len_g01253 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g12788 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g49274 No alias co-chaperone *(Hsp40) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g16873 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
MA_91734g0010 No alias Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.02 OrthoFinder output from all 47 species
Mp8g17710.1 No alias co-chaperone (Hsp40) 0.07 OrthoFinder output from all 47 species
Msp_g07269 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07525 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09958 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18499 No alias co-chaperone *(Hsp40) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g25863 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33115 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12500 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13465 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g08527 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14679 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17926 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014072 No alias co-chaperone *(Hsp40) & original description: CDS=133-1413 0.03 OrthoFinder output from all 47 species
Smo167519 No alias Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.02 OrthoFinder output from all 47 species
Smo271998 No alias Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species
Smo430412 No alias Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species
Spa_g08504 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10094 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02021 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07806 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016156_P001 Zm00001e016156 co-chaperone (Hsp40) 0.03 OrthoFinder output from all 47 species
Zm00001e021762_P003 Zm00001e021762 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0031072 heat shock protein binding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002939 DnaJ_C 210 428
IPR001305 HSP_DnaJ_Cys-rich_dom 237 301
IPR001623 DnaJ_domain 86 147
No external refs found!