Sam_g16201


Description : not classified & original description: none


Gene families : OG0000738 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000738_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16201

Target Alias Description ECC score Gene Family Method Actions
AT2G46250 No alias myosin heavy chain-related 0.02 OrthoFinder output from all 47 species
Ala_g02258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71808.t1 Aspi01Gene71808 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027031001 No alias Uncharacterized protein At5g41620 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
MA_10429999g0020 No alias Uncharacterized protein At5g41620 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g45598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30562 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0221.g026205 No alias not classified & original description: CDS=231-2393 0.03 OrthoFinder output from all 47 species
Solyc12g005010.2.1 Solyc12g005010 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g51597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP HCCA
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!