Sam_g16152


Description : component *(TWD40) of TPLATE AP-2 co-adaptor complex & original description: none


Gene families : OG0005180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005180_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16152

Target Alias Description ECC score Gene Family Method Actions
AT5G24710 No alias Transducin/WD40 repeat-like superfamily protein 0.06 OrthoFinder output from all 47 species
Als_g28919 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Ceric.33G065100.1 Ceric.33G065100 component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Cre12.g535350 No alias No description available 0.04 OrthoFinder output from all 47 species
Dcu_g06508 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Ehy_g07131 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01029823001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Gb_38178 No alias component TWD40 of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species
LOC_Os01g46510.1 LOC_Os01g46510 component TWD40 of TPLATE AP-2 co-adaptor complex 0.05 OrthoFinder output from all 47 species
Lfl_g07125 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
MA_10432673g0010 No alias component TWD40 of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species
MA_10437103g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp2g04690.1 No alias component TWD40 of TPLATE AP-2 co-adaptor complex 0.05 OrthoFinder output from all 47 species
Msp_g15509 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Pir_g04477 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Smo92496 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 OrthoFinder output from all 47 species
Zm00001e020289_P001 Zm00001e020289 component TWD40 of TPLATE AP-2 co-adaptor complex 0.04 OrthoFinder output from all 47 species
Zm00001e027982_P002 Zm00001e027982 component TWD40 of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000387 spliceosomal snRNP assembly IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 201 242
No external refs found!