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  5. Sam_g14929

Sam_g14929


Description : regulatory component B of PP2A phosphatase complexes & original description: none


Gene families : OG0001207 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001207_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14929

Target Alias Description ECC score Gene Family Method Actions
AT1G17720 ATB BETA Protein phosphatase 2A, regulatory subunit PR55 0.02 OrthoFinder output from all 47 species
Adi_g018486 ATB BETA regulatory component B of PP2A phosphatase complexes &... 0.02 OrthoFinder output from all 47 species
Ceric.08G043200.1 ATB BETA, Ceric.08G043200 regulatory component B of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
Ehy_g30680 ATB BETA regulatory component B of PP2A phosphatase complexes &... 0.02 OrthoFinder output from all 47 species
GSVIVT01016885001 ATB BETA Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
Msp_g03538 ATB BETA regulatory component B of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
Ore_g30375 ATB BETA regulatory component B of PP2A phosphatase complexes &... 0.02 OrthoFinder output from all 47 species
Zm00001e024928_P004 ATB BETA, Zm00001e024928 regulatory component B of PP2A phosphatase complexes 0.02 OrthoFinder output from all 47 species
Zm00001e037172_P002 ATB BETA, Zm00001e037172 regulatory component B of PP2A phosphatase complexes 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!