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  5. Sam_g14867

Sam_g14867


Description : translation elongation factor *(EF-P) & original description: none


Gene families : OG0006339 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14867
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Aev_g00711 No alias translation elongation factor *(EF-P) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene26427.t1 Aspi01Gene26427 translation elongation factor *(EF-P) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0359.g066840 No alias translation elongation factor *(EF-P) & original... 0.02 OrthoFinder output from all 47 species
Ceric.24G041300.1 Ceric.24G041300 translation elongation factor *(EF-P) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g11332 No alias translation elongation factor *(EF-P) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os11g02450.1 LOC_Os11g02450 EF-P translation elongation factor 0.03 OrthoFinder output from all 47 species
LOC_Os12g02380.1 LOC_Os12g02380 EF-P translation elongation factor 0.02 OrthoFinder output from all 47 species
Msp_g01862 No alias translation elongation factor *(EF-P) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g06931 No alias translation elongation factor *(EF-P) & original... 0.03 OrthoFinder output from all 47 species
Ore_g18750 No alias translation elongation factor *(EF-P) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e039313_P003 Zm00001e039313 EF-P translation elongation factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR013185 Transl_elong_KOW-like 53 110
IPR015365 Elong-fact-P_C 179 234
IPR001059 Transl_elong_P/YeiP_cen 121 171
No external refs found!