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  5. Sam_g14567

Sam_g14567


Description : component *(PES) of ribosome PES-BOP1-WDR12 (PeBoW) complex & original description: none


Gene families : OG0005537 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005537_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14567

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00157670 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AT5G14520 No alias pescadillo-related 0.03 OrthoFinder output from all 47 species
Aop_g17990 No alias component *(PES) of ribosome PES-BOP1-WDR12 (PeBoW)... 0.03 OrthoFinder output from all 47 species
Cre16.g683793 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Dde_g02318 No alias component *(PES) of ribosome PES-BOP1-WDR12 (PeBoW)... 0.05 OrthoFinder output from all 47 species
Ehy_g01487 No alias component *(PES) of ribosome PES-BOP1-WDR12 (PeBoW)... 0.02 OrthoFinder output from all 47 species
Gb_12407 No alias component PES of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.05 OrthoFinder output from all 47 species
Pnu_g11624 No alias component *(PES) of ribosome PES-BOP1-WDR12 (PeBoW)... 0.02 OrthoFinder output from all 47 species
Solyc07g047670.3.1 Solyc07g047670 component PES of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.02 OrthoFinder output from all 47 species
Spa_g18753 No alias component *(PES) of ribosome PES-BOP1-WDR12 (PeBoW)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEA Interproscan
BP GO:0042254 ribosome biogenesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR010613 PES 14 277
No external refs found!