1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g09987

Sam_g09987


Description : not classified & original description: none


Gene families : OG0005122 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005122_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g09987

Target Alias Description ECC score Gene Family Method Actions
AT3G59980 No alias Nucleic acid-binding, OB-fold-like protein 0.02 OrthoFinder output from all 47 species
Adi_g007557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18841 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.36G033800.1 Ceric.36G033800 not classified & original description: pacid=50568757... 0.07 OrthoFinder output from all 47 species
Cre01.g046652 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 OrthoFinder output from all 47 species
Cre08.g364650 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
Dde_g01340 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04354 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01038277001 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Mp1g24710.1 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Nbi_g29946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0124.g021577 No alias not classified & original description: CDS=1-888 0.03 OrthoFinder output from all 47 species
Solyc08g015960.3.1 Solyc08g015960 Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Tin_g00500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR002547 tRNA-bd_dom 82 177
No external refs found!