Sam_g09480


Description : not classified & original description: none


Gene families : OG0005276 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005276_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g09480
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Ala_g01566 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14043 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0157.g053785 No alias not classified & original description: CDS=31-933 0.05 OrthoFinder output from all 47 species
Dac_g08843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g02709 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Mp5g03320.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g04619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19843 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g12514 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001047 No alias not classified & original description: CDS=58-897 0.02 OrthoFinder output from all 47 species
Spa_g04768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!