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  5. Lfl_g24059

Lfl_g24059


Description : RAB5 canonical effector *(EREX) & original description: none


Gene families : OG0002176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


    • Type Description Actions
    Neighborhood HRR: Lfl_g24059

    Target Alias Description ECC score Gene Family Method Actions
    Als_g19085 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
    Aob_g06715 No alias RAB5 canonical effector *(EREX) & original description: none 0.03 OrthoFinder output from all 47 species
    Cre11.g467681 No alias No description available 0.01 OrthoFinder output from all 47 species
    Dac_g09488 No alias RAB5 canonical effector *(EREX) & original description: none 0.03 OrthoFinder output from all 47 species
    Len_g24192 No alias RAB5 canonical effector *(EREX) & original description: none 0.03 OrthoFinder output from all 47 species
    Pir_g01046 No alias RAB5 canonical effector *(EREX) & original description: none 0.03 OrthoFinder output from all 47 species
    Pir_g01675 No alias RAB5 canonical effector *(EREX) & original description: none 0.03 OrthoFinder output from all 47 species
    Solyc08g042130.2.1 Solyc08g042130 canonical RAB5 effector (EREX) 0.02 OrthoFinder output from all 47 species
    Tin_g13014 No alias RAB5 canonical effector *(EREX) & original description: none 0.02 OrthoFinder output from all 47 species
    Zm00001e037488_P001 Zm00001e037488 canonical RAB5 effector (EREX) 0.02 OrthoFinder output from all 47 species

    Type GO Term Name Evidence Source
    MF GO:0035091 phosphatidylinositol binding IEA Interproscan
    Toggle parental
    Type GO Term Name Evidence Source
    CC GO:0000145 exocyst IEP HCCA
    MF GO:0000166 nucleotide binding IEP HCCA
    MF GO:0003676 nucleic acid binding IEP HCCA
    MF GO:0003723 RNA binding IEP HCCA
    MF GO:0004672 protein kinase activity IEP HCCA
    MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
    MF GO:0005524 ATP binding IEP HCCA
    MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
    BP GO:0006325 chromatin organization IEP HCCA
    BP GO:0006334 nucleosome assembly IEP HCCA
    BP GO:0006338 chromatin remodeling IEP HCCA
    BP GO:0006399 tRNA metabolic process IEP HCCA
    BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
    BP GO:0006468 protein phosphorylation IEP HCCA
    BP GO:0006473 protein acetylation IEP HCCA
    BP GO:0006474 N-terminal protein amino acid acetylation IEP HCCA
    BP GO:0006807 nitrogen compound metabolic process IEP HCCA
    BP GO:0006887 exocytosis IEP HCCA
    BP GO:0008150 biological_process IEP HCCA
    BP GO:0008152 metabolic process IEP HCCA
    BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP HCCA
    BP GO:0009987 cellular process IEP HCCA
    MF GO:0016874 ligase activity IEP HCCA
    MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
    MF GO:0017076 purine nucleotide binding IEP HCCA
    BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP HCCA
    BP GO:0018193 peptidyl-amino acid modification IEP HCCA
    BP GO:0018205 peptidyl-lysine modification IEP HCCA
    BP GO:0018206 peptidyl-methionine modification IEP HCCA
    BP GO:0019538 protein metabolic process IEP HCCA
    BP GO:0022607 cellular component assembly IEP HCCA
    MF GO:0030554 adenyl nucleotide binding IEP HCCA
    CC GO:0031248 protein acetyltransferase complex IEP HCCA
    BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
    CC GO:0031414 N-terminal protein acetyltransferase complex IEP HCCA
    CC GO:0031417 NatC complex IEP HCCA
    MF GO:0032553 ribonucleotide binding IEP HCCA
    MF GO:0032555 purine ribonucleotide binding IEP HCCA
    MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
    BP GO:0032940 secretion by cell IEP HCCA
    CC GO:0032991 protein-containing complex IEP HCCA
    BP GO:0034728 nucleosome organization IEP HCCA
    MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
    MF GO:0036094 small molecule binding IEP HCCA
    BP GO:0036211 protein modification process IEP HCCA
    BP GO:0043038 amino acid activation IEP HCCA
    BP GO:0043039 tRNA aminoacylation IEP HCCA
    MF GO:0043167 ion binding IEP HCCA
    MF GO:0043168 anion binding IEP HCCA
    BP GO:0043170 macromolecule metabolic process IEP HCCA
    BP GO:0043412 macromolecule modification IEP HCCA
    BP GO:0043543 protein acylation IEP HCCA
    BP GO:0043933 protein-containing complex organization IEP HCCA
    BP GO:0044238 primary metabolic process IEP HCCA
    BP GO:0046903 secretion IEP HCCA
    BP GO:0051604 protein maturation IEP HCCA
    BP GO:0065003 protein-containing complex assembly IEP HCCA
    BP GO:0065004 protein-DNA complex assembly IEP HCCA
    BP GO:0071704 organic substance metabolic process IEP HCCA
    BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
    MF GO:0097159 organic cyclic compound binding IEP HCCA
    MF GO:0097367 carbohydrate derivative binding IEP HCCA
    CC GO:0099023 vesicle tethering complex IEP HCCA
    MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
    BP GO:0140352 export from cell IEP HCCA
    CC GO:0140535 intracellular protein-containing complex IEP HCCA
    MF GO:1901265 nucleoside phosphate binding IEP HCCA
    MF GO:1901363 heterocyclic compound binding IEP HCCA
    BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
    MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
    CC GO:1902493 acetyltransferase complex IEP HCCA
    MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
    CC GO:1990234 transferase complex IEP HCCA
    InterPro domains Description Start Stop
    IPR001683 PX_dom 92 165
    No external refs found!