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  5. Aob_g16302

Aob_g16302


Description : assembly factor CcsB of CCS cytochrome f/c6 maturation system (system II) & original description: none


Gene families : OG0005948 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005948_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g16302

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00156080 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
AT1G49380 No alias cytochrome c biogenesis protein family 0.07 OrthoFinder output from all 47 species
Adi_g012769 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.08 OrthoFinder output from all 47 species
Ala_g05684 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.07 OrthoFinder output from all 47 species
Aspi01Gene04834.t1 Aspi01Gene04834 assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Azfi_s0187.g056718 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Cba_g18801 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Cre13.g575000 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 OrthoFinder output from all 47 species
Dcu_g03888 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Dde_g26694 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Ehy_g04866 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.06 OrthoFinder output from all 47 species
GSVIVT01031911001 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.07 OrthoFinder output from all 47 species
Gb_26769 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Len_g09808 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
MA_10434753g0010 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.09 OrthoFinder output from all 47 species
Mp3g21290.1 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Msp_g26028 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Nbi_g19038 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.14 OrthoFinder output from all 47 species
Ore_g05642 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Pir_g61712 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Pnu_g11622 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.07 OrthoFinder output from all 47 species
Smo52887 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.05 OrthoFinder output from all 47 species
Spa_g12033 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Tin_g14096 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR007816 ResB-like_domain 514 631
IPR007816 ResB-like_domain 219 482
No external refs found!