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  5. Aob_g13774

Aob_g13774 (EDD, EDD1)


Aliases : EDD, EDD1

Description : glycine-tRNA ligase & original description: none


Gene families : OG0005277 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005277_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g13774
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Adi_g015460 EDD, EDD1 glycine-tRNA ligase & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g02635 EDD, EDD1 glycine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13775 EDD, EDD1 glycine-tRNA ligase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene39875.t1 EDD, EDD1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0472.g072933 EDD, EDD1 glycine-tRNA ligase & original description: CDS=154-3516 0.04 OrthoFinder output from all 47 species
Cba_g05311 EDD, EDD1 glycine-tRNA ligase & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.32G004800.1 EDD, EDD1,... glycine-tRNA ligase & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001466.1 EDD, EDD1 Glycine--tRNA ligase, chloroplastic/mitochondrial 2... 0.02 OrthoFinder output from all 47 species
Cre10.g433000 EDD, EDD1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
Dac_g18159 EDD, EDD1 glycine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01951 EDD, EDD1 glycine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21151 EDD, EDD1 glycine-tRNA ligase & original description: none 0.05 OrthoFinder output from all 47 species
Gb_13783 EDD, EDD1 glycine-tRNA ligase 0.04 OrthoFinder output from all 47 species
LOC_Os06g01400.1 EDD, EDD1, LOC_Os06g01400 glycine-tRNA ligase 0.06 OrthoFinder output from all 47 species
Mp8g04520.1 EDD, EDD1 glycine-tRNA ligase 0.05 OrthoFinder output from all 47 species
Msp_g13173 EDD, EDD1 glycine-tRNA ligase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g18283 EDD, EDD1 glycine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g49402 EDD, EDD1 glycine-tRNA ligase & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004820 glycine-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006426 glycyl-tRNA aminoacylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR015944 Gly-tRNA-synth_bsu 413 959
IPR002310 Gly-tRNA_ligase_asu 101 378
No external refs found!