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  5. Aob_g02321

Aob_g02321 (SECA1, AtcpSecA, AGY1)


Aliases : SECA1, AtcpSecA, AGY1

Description : component *(SecA1) of thylakoid membrane Sec1 translocation system & original description: none


Gene families : OG0001541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g02321
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00116920 SECA1, AtcpSecA,... Protein translocation.chloroplast.thylakoid membrane... 0.04 OrthoFinder output from all 47 species
AT1G21650 SECA2 Preprotein translocase SecA family protein 0.03 OrthoFinder output from all 47 species
AT4G01800 SECA1, AtcpSecA, AGY1 Albino or Glassy Yellow 1 0.03 OrthoFinder output from all 47 species
Adi_g007063 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Aev_g01548 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Ala_g03630 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Ala_g19639 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.03 OrthoFinder output from all 47 species
Ala_g26842 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.06 OrthoFinder output from all 47 species
Aop_g13757 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.06 OrthoFinder output from all 47 species
Aop_g60479 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.06 OrthoFinder output from all 47 species
Aspi01Gene24355.t1 SECA1, AtcpSecA,... component *(SecA1) of thylakoid membrane Sec1... 0.02 OrthoFinder output from all 47 species
Azfi_s0155.g053632 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Cba_g17139 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Ceric.02G067600.1 SECA1, AtcpSecA,... component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000219.51 SECA1, AtcpSecA, AGY1 Protein translocase subunit SecA, chloroplastic... 0.02 OrthoFinder output from all 47 species
Cre12.g517900 SECA1, AtcpSecA, AGY1 Protein translocation.chloroplast.thylakoid membrane... 0.02 OrthoFinder output from all 47 species
Dac_g06495 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
Dac_g06496 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Dcu_g05773 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Dde_g09974 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.02 OrthoFinder output from all 47 species
GSVIVT01028249001 SECA1, AtcpSecA, AGY1 Protein translocation.chloroplast.thylakoid membrane... 0.05 OrthoFinder output from all 47 species
Gb_00858 SECA1, AtcpSecA, AGY1 Protein translocase subunit SecA, chloroplastic... 0.05 OrthoFinder output from all 47 species
Gb_34931 SECA1, AtcpSecA, AGY1 component SecA1 of thylakoid membrane Sec1 translocation system 0.04 OrthoFinder output from all 47 species
LOC_Os01g21820.1 SECA1, AtcpSecA,... component SecA2 of inner envelope Sec2 post-import... 0.05 OrthoFinder output from all 47 species
Len_g36322 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Lfl_g02357 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.06 OrthoFinder output from all 47 species
MA_8762g0010 SECA1, AtcpSecA, AGY1 Protein translocase subunit SECA1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp5g09750.1 SECA1, AtcpSecA, AGY1 component SecA1 of thylakoid membrane Sec1 translocation system 0.03 OrthoFinder output from all 47 species
Msp_g23936 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Nbi_g15165 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Nbi_g30518 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
Ore_g18515 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Pir_g06026 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Ppi_g05317 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Ppi_g14444 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011794 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.03 OrthoFinder output from all 47 species
Sam_g15982 No alias component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Smo156007 SECA1, AtcpSecA, AGY1 Protein translocation.chloroplast.thylakoid membrane... 0.02 OrthoFinder output from all 47 species
Solyc01g080840.3.1 SECA1, AtcpSecA,... component SecA1 of thylakoid membrane Sec1 translocation system 0.05 OrthoFinder output from all 47 species
Spa_g10168 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Spa_g17299 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
Tin_g12949 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Zm00001e017535_P001 SECA1, AtcpSecA,... component SecA1 of thylakoid membrane Sec1 translocation system 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0017038 protein import IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011130 SecA_preprotein_X-link_dom 334 440
IPR011115 SecA_DEAD 116 484
IPR011116 SecA_Wing/Scaffold 792 1006
No external refs found!