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  5. Dde_g26362

Dde_g26362


Description : not classified & original description: none


Gene families : OG0011229 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011229_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g26362
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
Als_g20186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42393.t1 Aspi01Gene42393 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05929 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 661 684
IPR002885 Pentatricopeptide_repeat 255 282
IPR002885 Pentatricopeptide_repeat 459 482
IPR002885 Pentatricopeptide_repeat 487 516
IPR002885 Pentatricopeptide_repeat 383 431
IPR002885 Pentatricopeptide_repeat 585 632
IPR002885 Pentatricopeptide_repeat 688 733
IPR002885 Pentatricopeptide_repeat 283 326
IPR002885 Pentatricopeptide_repeat 788 827
IPR002885 Pentatricopeptide_repeat 889 935
IPR002885 Pentatricopeptide_repeat 181 229
No external refs found!