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Aliases : TRXF2, ATF2
Description : F-type thioredoxin *(Trx-F) & original description: none
Gene families : OG0001099 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001099_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00049p00119540 | ATF1, TRXF1,... | Redox homeostasis.chloroplast redox homeostasis.F-type... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G02730 | ATF1, TRXF1 | thioredoxin F-type 1 | 0.08 | OrthoFinder output from all 47 species | |
| AT5G16400 | TRXF2, ATF2 | thioredoxin F2 | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g003203 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g102129 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g06364 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g00422 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Aob_g02927 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g14486 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0388.g067618 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: CDS=462-1067 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g12466 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Cba_g37399 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cre01.g066552 | ATTRX1, ATTRX H1, TRX1 | Redox homeostasis.chloroplast redox homeostasis.F-type... | 0.01 | OrthoFinder output from all 47 species | |
| Cre05.g243050 | TRXF2, ATF2 | Redox homeostasis.chloroplast redox homeostasis.F-type... | 0.08 | OrthoFinder output from all 47 species | |
| Cre12.g496700 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g09180 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g12430 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01019070001 | TRXF2, ATF2 | Redox homeostasis.chloroplast redox homeostasis.F-type... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_20154 | ATF1, TRXF1 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18423 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g11575 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g08490.1 | ATF1, TRXF1 | F-type thioredoxin | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g29081 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g02641 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g14018 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26787 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g12320 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Pnu_g19425 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g00498 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g30576 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g33020 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0059.g015100 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: CDS=110-658 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0134.g022310 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: CDS=118-813 | 0.05 | OrthoFinder output from all 47 species | |
| Smo110708 | TRXF2, ATF2 | Redox homeostasis.chloroplast redox homeostasis.F-type... | 0.06 | OrthoFinder output from all 47 species | |
| Smo77812 | ATH5, ATTRX5, TRX5, LIV1 | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g056300.4.1 | ATF1, TRXF1,... | F-type thioredoxin | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g22200 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g51722 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g21213 | TRXF2, ATF2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027512_P002 | TRXF2, ATF2,... | F-type thioredoxin | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e040421_P002 | TRXF2, ATF2,... | F-type thioredoxin | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015297 | antiporter activity | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016211 | ammonia ligase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0034357 | photosynthetic membrane | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| CC | GO:0042651 | thylakoid membrane | IEP | HCCA |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013766 | Thioredoxin_domain | 84 | 179 |
| No external refs found! |