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  5. Dde_g25336

Dde_g25336


Description : uridine 5-carboxymethylaminomethyl modification enzyme *(GidA) & original description: none


Gene families : OG0005421 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g25336
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Adi_g013172 No alias uridine 5-carboxymethylaminomethyl modification enzyme... 0.04 OrthoFinder output from all 47 species
Als_g08563 No alias uridine 5-carboxymethylaminomethyl modification enzyme... 0.04 OrthoFinder output from all 47 species
Ceric.18G028200.1 Ceric.18G028200 uridine 5-carboxymethylaminomethyl modification enzyme... 0.04 OrthoFinder output from all 47 species
Gb_06237 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_14800 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g72980.1 LOC_Os01g72980 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g24318 No alias uridine 5-carboxymethylaminomethyl modification enzyme... 0.05 OrthoFinder output from all 47 species
MA_10429230g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10434395g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g24040.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g13557 No alias uridine 5-carboxymethylaminomethyl modification enzyme... 0.05 OrthoFinder output from all 47 species
Smo415636 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR040131 MnmG_N 95 486
IPR026904 MnmG_C 489 703
No external refs found!