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  5. Dde_g13728

Dde_g13728 (PDE181, ZDS, SPC1)


Aliases : PDE181, ZDS, SPC1

Description : zeta-carotene desaturase *(ZDS) & original description: none


Gene families : OG0004455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004455_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g13728
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00029180 PDE181, ZDS,... Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
AT3G04870 PDE181, ZDS, SPC1 zeta-carotene desaturase 0.03 OrthoFinder output from all 47 species
Aop_g21819 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.08 OrthoFinder output from all 47 species
Azfi_s0010.g012159 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G066700.1 PDE181, ZDS,... zeta-carotene desaturase *(ZDS) & original description:... 0.04 OrthoFinder output from all 47 species
Cre07.g314150 PDE181, ZDS, SPC1 Secondary metabolism.terpenoids.terpenoid... 0.06 OrthoFinder output from all 47 species
Dac_g43255 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12247 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19011 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12341 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05500 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.04 OrthoFinder output from all 47 species
Mp5g14090.1 PDE181, ZDS, SPC1 zeta-carotene desaturase (ZDS) 0.04 OrthoFinder output from all 47 species
Nbi_g03042 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g07998 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c17_7790V3.1 PDE181, ZDS,... zeta-carotene desaturase 0.01 OrthoFinder output from all 47 species
Ppi_g12002 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25901 No alias zeta-carotene desaturase *(ZDS) & original description: none 0.04 OrthoFinder output from all 47 species
Smo146971 PDE181, ZDS, SPC1 Secondary metabolism.terpenoids.terpenoid... 0.04 OrthoFinder output from all 47 species
Solyc01g097810.3.1 PDE181, ZDS,... zeta-carotene desaturase (ZDS) 0.02 OrthoFinder output from all 47 species
Spa_g18923 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19386 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 110 574
No external refs found!