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  5. Dde_g13633

Dde_g13633 (SECA1, AtcpSecA, AGY1)


Aliases : SECA1, AtcpSecA, AGY1

Description : component *(SecA1) of thylakoid membrane Sec1 translocation system & original description: none


Gene families : OG0001541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g13633
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00116920 SECA1, AtcpSecA,... Protein translocation.chloroplast.thylakoid membrane... 0.07 OrthoFinder output from all 47 species
AT4G01800 SECA1, AtcpSecA, AGY1 Albino or Glassy Yellow 1 0.03 OrthoFinder output from all 47 species
Ala_g03630 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Aop_g13757 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Aop_g60479 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Azfi_s0155.g053632 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.07 OrthoFinder output from all 47 species
Ceric.02G067600.1 SECA1, AtcpSecA,... component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Cre12.g517900 SECA1, AtcpSecA, AGY1 Protein translocation.chloroplast.thylakoid membrane... 0.09 OrthoFinder output from all 47 species
Ehy_g07099 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.02 OrthoFinder output from all 47 species
GSVIVT01028249001 SECA1, AtcpSecA, AGY1 Protein translocation.chloroplast.thylakoid membrane... 0.03 OrthoFinder output from all 47 species
Gb_00858 SECA1, AtcpSecA, AGY1 Protein translocase subunit SecA, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os01g21820.1 SECA1, AtcpSecA,... component SecA2 of inner envelope Sec2 post-import... 0.05 OrthoFinder output from all 47 species
Len_g36322 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
MA_8762g0010 SECA1, AtcpSecA, AGY1 Protein translocase subunit SECA1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp5g09750.1 SECA1, AtcpSecA, AGY1 component SecA1 of thylakoid membrane Sec1 translocation system 0.06 OrthoFinder output from all 47 species
Msp_g23936 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Nbi_g15165 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Ore_g18515 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Ppi_g14444 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011794 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016761 SECA1, AtcpSecA, AGY1 channel-forming component *(Tim23) of inner... 0.03 OrthoFinder output from all 47 species
Sam_g15982 No alias component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Sam_g28166 No alias component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Smo156007 SECA1, AtcpSecA, AGY1 Protein translocation.chloroplast.thylakoid membrane... 0.02 OrthoFinder output from all 47 species
Solyc01g080840.3.1 SECA1, AtcpSecA,... component SecA1 of thylakoid membrane Sec1 translocation system 0.02 OrthoFinder output from all 47 species
Spa_g10168 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Zm00001e008967_P001 SECA2, Zm00001e008967 component SecA2 of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species
Zm00001e017535_P001 SECA1, AtcpSecA,... component SecA1 of thylakoid membrane Sec1 translocation system 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0017038 protein import IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR011130 SecA_preprotein_X-link_dom 306 412
IPR011116 SecA_Wing/Scaffold 762 973
IPR011115 SecA_DEAD 90 456
No external refs found!