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  5. Aop_g62254

Aop_g62254


Description : not classified & original description: none


Gene families : OG0001705 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001705_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g62254

Target Alias Description ECC score Gene Family Method Actions
Adi_g022332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g16129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0065.g036002 No alias not classified & original description: CDS=388-1317 0.04 OrthoFinder output from all 47 species
Ceric.15G049100.1 Ceric.15G049100 not classified & original description: pacid=50640820... 0.03 OrthoFinder output from all 47 species
Lfl_g00962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50067 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010907_P001 Zm00001e010907 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR041492 HAD_2 103 263
No external refs found!