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  5. Aop_g19868

Aop_g19868


Description : not classified & original description: none


Gene families : OG0005137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g19868

Target Alias Description ECC score Gene Family Method Actions
Als_g10574 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009513 No alias not classified & original description: CDS=124-1149 0.03 OrthoFinder output from all 47 species
Ceric.16G010500.1 Ceric.16G010500 not classified & original description: pacid=50588889... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.19 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g04407 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01030118001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_40012 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os08g25700.1 LOC_Os08g25700 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g59826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g01920.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g04575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e022153_P001 Zm00001e022153 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR027379 CLS_N 325 361
No external refs found!