Aop_g12623 (EMB2369)

Aliases : EMB2369

Description : leucine-tRNA ligase & original description: none

Gene families : OG0005525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005525_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g12623
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00106p00046740	EMB2369,...	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.05	OrthoFinder output from all 47 species
Adi_g109524	EMB2369	leucine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g13379	EMB2369	leucine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.03G067300.1	EMB2369, Ceric.03G067300	leucine-tRNA ligase & original description:...	0.05	OrthoFinder output from all 47 species
Cre13.g578451	EMB2369	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.04	OrthoFinder output from all 47 species
Dac_g01026	EMB2369	leucine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g03124	EMB2369	leucine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g07073	EMB2369	leucine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g01662	EMB2369	leucine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01012668001	EMB2369	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.08	OrthoFinder output from all 47 species
Len_g36010	EMB2369	leucine-tRNA ligase & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g03404	EMB2369	leucine-tRNA ligase & original description: none	0.07	OrthoFinder output from all 47 species
Mp3g22600.1	EMB2369	leucine-tRNA ligase	0.03	OrthoFinder output from all 47 species
Nbi_g15838	EMB2369	leucine-tRNA ligase & original description: none	0.06	OrthoFinder output from all 47 species
Pir_g15404	EMB2369	leucine-tRNA ligase & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g16597	No alias	leucine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g28130	EMB2369	leucine-tRNA ligase & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e025691_P001	EMB2369, Zm00001e025691	leucine-tRNA ligase	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0002161	aminoacyl-tRNA editing activity	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	IEA	Interproscan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
MF	GO:0003951	NAD+ kinase activity	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
MF	GO:0004602	glutathione peroxidase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006741	NADP biosynthetic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016226	iron-sulfur cluster assembly	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0110102	ribulose bisphosphate carboxylase complex assembly	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002300	aa-tRNA-synth_Ia	762	798
IPR013155	M/V/L/I-tRNA-synth_anticd-bd	849	966
IPR015413	Methionyl/Leucyl_tRNA_Synth	159	291
IPR025709	Leu_tRNA-synth_edit	340	512

External Links

No external refs found!

Aop_g12623 (EMB2369)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation