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  5. Aop_g11352

Aop_g11352 (EBP1, ATEBP1, ATG2)


Aliases : EBP1, ATEBP1, ATG2

Description : pre-60S ribosomal-subunit proteome export factor *(ARX1) & original description: none


Gene families : OG0003188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003188_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g11352
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
AT3G51800 EBP1, ATEBP1, ATG2 metallopeptidase M24 family protein 0.08 OrthoFinder output from all 47 species
Adi_g117772 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.03 OrthoFinder output from all 47 species
Aev_g19911 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.03 OrthoFinder output from all 47 species
Ala_g08839 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015328 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.02 OrthoFinder output from all 47 species
Cba_g11791 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000553.33 EBP1, ATEBP1, ATG2 ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum 0.02 OrthoFinder output from all 47 species
Cre13.g604650 EBP1, ATEBP1, ATG2 ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum 0.03 OrthoFinder output from all 47 species
Dac_g02118 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.03 OrthoFinder output from all 47 species
Dac_g03227 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.05 OrthoFinder output from all 47 species
GSVIVT01003934001 EBP1, ATEBP1, ATG2 ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum 0.07 OrthoFinder output from all 47 species
Gb_24072 EBP1, ATEBP1, ATG2 pre-60S ribosomal subunit export factor (ARX1) 0.05 OrthoFinder output from all 47 species
LOC_Os05g28280.1 EBP1, ATEBP1,... pre-60S ribosomal subunit export factor (ARX1) 0.06 OrthoFinder output from all 47 species
Lfl_g01427 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.04 OrthoFinder output from all 47 species
MA_10426694g0010 EBP1, ATEBP1, ATG2 pre-60S ribosomal subunit export factor (ARX1) 0.03 OrthoFinder output from all 47 species
Mp8g14760.1 EBP1, ATEBP1, ATG2 pre-60S ribosomal subunit export factor (ARX1) 0.02 OrthoFinder output from all 47 species
Msp_g09415 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.03 OrthoFinder output from all 47 species
Nbi_g02808 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.03 OrthoFinder output from all 47 species
Sam_g19099 No alias pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.03 OrthoFinder output from all 47 species
Solyc06g007200.4.1 EBP1, ATEBP1,... pre-60S ribosomal subunit export factor (ARX1) 0.04 OrthoFinder output from all 47 species
Solyc06g082090.4.1 EBP1, ATEBP1,... pre-60S ribosomal subunit export factor (ARX1) 0.02 OrthoFinder output from all 47 species
Spa_g54762 EBP1, ATEBP1, ATG2 pre-60S ribosomal-subunit proteome export factor *(ARX1)... 0.05 OrthoFinder output from all 47 species
Zm00001e027220_P002 EBP1, ATEBP1,... pre-60S ribosomal subunit export factor (ARX1) 0.09 OrthoFinder output from all 47 species
Zm00001e031491_P001 EBP1, ATEBP1,... pre-60S ribosomal subunit export factor (ARX1) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000994 Pept_M24 22 225
No external refs found!