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  5. Aop_g06658

Aop_g06658


Description : not classified & original description: none


Gene families : OG0008277 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g06658

Target Alias Description ECC score Gene Family Method Actions
Ala_g11236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0024.g020367 No alias not classified & original description: CDS=38-2191 0.04 OrthoFinder output from all 47 species
Ceric.07G027900.1 Ceric.07G027900 not classified & original description: pacid=50626329... 0.04 OrthoFinder output from all 47 species
Cre01.g006150 ATSCO1/CPEF-G,... Elongation factor G, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Lfl_g03119 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10435583g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10435660g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g08757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g37172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo405094 No alias Elongation factor G-2, chloroplastic OS=Glycine max 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 422 487
IPR032090 RF3_C 494 621
IPR000795 T_Tr_GTP-bd_dom 118 384
No external refs found!