- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : not classified & original description: none
Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00004p00050160 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.PHD finger... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g020053 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g13062 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16047 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g20182 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g20272 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g32072 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g32073 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13559 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene19628.t1 | Aspi01Gene19628 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene25981.t1 | Aspi01Gene25981 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene53152.t1 | Aspi01Gene53152 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g010269 | No alias | not classified & original description: CDS=1215-6422 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0519.g075228 | No alias | not classified & original description: CDS=211-3699 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g16245 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G075300.1 | Ceric.04G075300 | not classified & original description: pacid=50631416... | 0.11 | OrthoFinder output from all 47 species | |
| Ceric.19G070400.1 | Ceric.19G070400 | not classified & original description: pacid=50576012... | 0.07 | OrthoFinder output from all 47 species | |
| Cre08.g386000 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g09002 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g16965 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01014219001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01017972001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_06644 | No alias | component IDM1 of ROS1-recruitment complex. PHD finger... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g07690.1 | LOC_Os07g07690 | PHD finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Len_g47387 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_139275g0010 | No alias | PHD finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| MA_14500g0010 | No alias | component IDM1 of ROS1-recruitment complex. PHD finger... | 0.05 | OrthoFinder output from all 47 species | |
| MA_3931g0010 | No alias | PHD finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g20670.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp6g21090.2 | No alias | PHD finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g13348 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g29122 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g13767 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g18818 | No alias | component *(IDM1) of ROS1-recruitment complex & original... | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g01695 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g06867 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g18645 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g08147 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004313 | No alias | not classified & original description: CDS=588-5219 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g15944 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16192 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g065340.3.1 | Solyc09g065340 | PHD finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g076010.3.1 | Solyc09g076010 | PHD finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50990 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Tin_g21039 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g27963 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005667_P001 | Zm00001e005667 | PHD finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e032904_P002 | Zm00001e032904 | PHD finger transcription factor | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |